Rhizobium gallicum bv. gallicum: RGR602_CH02498
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Entry
RGR602_CH02498 CDS
T03539
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga00470
D-Amino acid metabolism
rga00550
Peptidoglycan biosynthesis
rga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGR602_CH02498 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGR602_CH02498 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rga01011
]
RGR602_CH02498 (murD)
Enzymes [BR:
rga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RGR602_CH02498 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rga01011
]
Precursor biosynthesis
Amino acid ligase
RGR602_CH02498 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AJD41823
UniProt:
A0A0B4X5J3
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Position
complement(2478287..2479699)
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AA seq
470 aa
AA seq
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MIPVTTFAGKKVALFGLGGSGFATARALILGGAHVTAWDDNPDSVIKAAAEGIHTADLRI
IDWSVQSLFVLSPGVPLTHPKPHWTVDLARAAGVDIVGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKSSGRDTQLGGNIGTAVLTLDPPKAGRYYVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTIQHYAGIKERLVAGSGTAIVGVDDSHCEMIADRVERAGTK
VVRISRRHPLADGIYAEGTKLMQASSAAALPLADLDGIQTLRGGHNAQNAAAAVAACLAV
GVSAEEIRTGLASFPGLKHRMQPIGTRGKVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKAGGITTLAPFFPRIAKAYLIGEAAAEFAATLGEAVPYEISGRLDRAVAHAAADAEKD
DTGPSAVMLSPACASFDQYKNFEVRGDAFVSHVAALDGVTMLVDSATGDK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcacgacgtttgcaggaaagaaggtcgcgctattcgggcttggcgggtcc
ggatttgcaacggcccgcgcgcttattctgggcggcgcccatgtcacggcctgggacgat
aatccggacagtgtcatcaaggcggccgccgagggtatccataccgcggacctgcgaatc
atcgattggagcgttcagtcgctcttcgttctgtcgccgggtgtgccgctcacgcatccg
aaaccgcattggactgtcgatctcgcccgcgccgccggtgtcgatatcgttggcgatgtc
gaactcttcgtgcgcgagcgccgggcgcatgcgcccgattgcccgttcatcgccatcaca
ggcacgaacggcaagtcgacgacgaccgcgctgattgctcatatcctgaaatccagcggc
cgcgacacgcagcttggcggcaacatcggaacggccgtgctgacgctcgatccgccgaag
gccggacgctactatgtcgtcgagtgctcctcctaccagatcgatctggcgccgacgctc
aatccctcggcaggtatcctgctcaacctgacgcctgatcatctcgatcgtcacggcacg
atacagcactatgccggcatcaaggagcgtttggttgccggcagcggcaccgctatcgtt
ggcgtcgatgacagtcattgcgaaatgatcgctgatcgcgtcgagcgggcaggaacgaag
gtggtccgcatatcgcgccgccatccgctggccgatggaatctatgccgagggtacgaag
ctcatgcaggcttcttcggctgcggctctgccgcttgccgatctcgacggcatccagacg
ctacgcggcggccacaatgctcagaatgccgctgcagcggtcgccgcctgccttgccgtc
ggcgtttcggccgaagaaattcgcaccgggcttgcctccttccccggcctcaaacatcgg
atgcagccgatcgggacacgcggcaaagtcgtctttgtcaacgattcgaaagcgactaac
gcagacgccgcagcgcccgcgctttccagctacgatcgcatctactggatcgccggtggt
ctgccgaaggcgggaggtatcacgacgcttgccccgttcttcccgcgcatcgccaaggcc
tatttgatcggcgaagcggcggcagaatttgccgcgacgctcggcgaggcggtgccctac
gagatttcggggaggctggatcgcgcggttgcccatgccgcagccgatgcggaaaaagat
gacactggtccatccgcggtgatgttatccccggcttgcgcaagcttcgaccagtacaag
aacttcgaagtcaggggcgatgcatttgtcagccatgtggcagcgctcgacggagtgacc
atgctggtcgattcggcaacaggagataaatga
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