Rhizobium gallicum bv. gallicum: RGR602_CH02680
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Entry
RGR602_CH02680 CDS
T03539
Name
(GenBank) poly(A) polymerase domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGR602_CH02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rga03019
]
RGR602_CH02680
Enzymes [BR:
rga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RGR602_CH02680
Messenger RNA biogenesis [BR:
rga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RGR602_CH02680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AJD42000
UniProt:
A0A0B4X5P2
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Position
complement(2659884..2661137)
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AA seq
417 aa
AA seq
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MTSLADEAWFKDPRLQRVFALLNADGGEGRVVGGAVRNSLMGLPVSDIDIATTLTPDAVT
ERAKASGSKAIPTGIEHGTVTLVIEGKPFEVTTLRTDVETDGRRARIAFSTDWQADAERR
DLTINALYMTSKGEVVDLVGGLADIEKRNIRFIGDAATRIAEDYLRILRFFRFFAHYGSG
RPDADGLRACSAARSKLTTLSSERIWSELRKLLAADDPGRALLWMRQVSVLSEVLPETEK
WGIDAIPALVATEKALGWKSDPLLRLASIVPPDAERLEKMAVRLRFSNAEAAYFRAWAAA
PPVDDEMSAAAFDRLLYRNRVDGIVTRLKLALAVARGKAEGDMKEMSRSARLGKLLDRAL
TWKRPQFPIGGSDVVSTGIPAGPRVGETLAKLENQWIDENFAADRAMLLARLNELSK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccttgctgatgaagcatggttcaaggacccccgccttcagcgcgtcttcgcg
ctcctgaacgcagacggcggggaggggcgcgtcgtgggcggcgccgtgcgcaacagcctg
atggggcttccagtaagcgatatcgacatcgcgacgacgctgacgccggacgccgtgacg
gaacgggcgaaggcatccggcagcaaggcgatccccaccggcatcgagcatggcaccgtg
acgctggtgatcgaaggaaagccgttcgaagtgacgacgctgcgcaccgacgtcgagact
gacgggcgccgcgccaggatcgccttcagcaccgactggcaggcggatgcggaacggcgc
gacctgacgatcaatgccctttacatgacttccaagggtgaggtggtcgatctcgtcggc
ggacttgccgatattgaaaagcgcaacatccgtttcattggggatgcggcgacacggatt
gccgaggactacctgcgcatcctgcggttcttccgcttttttgctcactacggctccggc
cggcccgatgcagacggactgcgggcctgttcggcggcgcggtcgaagctcactacactt
tcgtccgaaaggatttggtccgaacttcgcaagctgcttgctgccgacgatccgggccgg
gcgctgctctggatgcggcaggtttcggtgctcagcgaagtcctgccggagacggagaaa
tggggcatcgacgccatcccggcactggtcgctaccgaaaaggcgctcggctggaagtcc
gatccgcttcttcggctcgcttcgatcgttccgcccgatgccgaacggctggagaagatg
gcggtccgcctgagattttcgaatgccgaagcggcctatttcagggcctgggcggcggcg
ccccccgtcgatgacgaaatgtctgccgcggccttcgaccggctgctctaccgcaatcgt
gtggacggtatcgtcacgcgcctgaagctcgcgctcgccgttgctcgcggcaaggcggaa
ggcgacatgaaggaaatgagccggtcggccaggctcggcaagctgttggatcgggccctg
acgtggaagagaccgcaatttccaatcggcggcagcgatgtcgtttccaccggaattccc
gcaggcccgcgtgtcggcgagacgcttgcgaaactcgaaaaccaatggatcgacgagaat
tttgccgccgaccgggcgatgctgctcgcccggctgaatgaactttcgaagtga
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