Rhizobium gallicum bv. gallicum: RGR602_CH03269
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Entry
RGR602_CH03269 CDS
T03539
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGR602_CH03269
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rga02000
]
RGR602_CH03269
Transporters [BR:
rga02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RGR602_CH03269
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Mg_chelatase
AAA
AAA_22
SRP54
SMC_N
AAA_25
Rad17
AAA_19
AAA_29
NACHT
AAA_5
AAA_16
nSTAND_NTPase5
AAA_30
AAA_14
PRK
RsgA_GTPase
ORC-CDC6-like
TsaE
nSTAND1
AAA_27
AAA_28
RNA_helicase
nSTAND3
NB-ARC
AAA_33
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AJD42579
UniProt:
A0A0B4X379
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Position
3310290..3311312
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AA seq
340 aa
AA seq
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MSDVYLQLDKLTLAYGDTVAVKDLDLSIAKGELVALLGPSGCGKTTTMRSIAGLLAPASG
RINLDGADITRVSANKRAVGLVFQSYALFPHLTVYENVAFGLRLKGINGQTLDSRVNAGI
KSVGLSSFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRAELQR
VQKETGVTMIFVTHDQAEALALADRIVVMLNGGIEQIGTPEEIYNKPVSAFVADFVGFEN
VFKLQNGRLVTPNGAIELSLPAPQAAGLAWRPSSVALGSGPFQGAVRGTSFAGNTREYLL
DTPLGRVKAEVDASLPPHEIGASLSFDLPLAAAATLTRFG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgtctatcttcaactcgataagctgacgctggcctacggcgatacggtcgcc
gtgaaggatctcgacctgtcgatcgccaagggcgaactcgtcgccttgctcggcccttca
ggctgcggcaagacgacgacgatgcgctccattgcaggtctgctcgcgcccgcctccggc
cgcatcaatctcgatggcgccgacatcacgcgggtttcggccaacaagcgcgccgtcggc
ctcgtcttccagtcctacgcgctcttcccgcacctgacggtctatgagaacgtcgccttc
ggccttcgcctcaagggtatcaacggacagaccctcgatagccgcgtcaacgccggcatc
aagtcagtcggcctctccagtttcgcttcacgcaaacccgcagaactctccggcggccag
cagcagcgagtggcgcttgcccgttccatggtcatggagccgaaggtgctcctgcttgac
gagccgctctccaacctcgacgcgcgcctgcgcctcgaaatgcgggcagaactgcagcgc
gtgcaaaaggaaaccggcgttactatgatcttcgtcacccacgaccaggcggaggccctg
gcccttgccgaccgtatcgtggtcatgctgaacggcggcatagagcagatcggcacgccg
gaagaaatctacaacaagccggtctccgccttcgttgccgatttcgtcggcttcgagaat
gtcttcaagctgcagaacggcaggcttgtcacgccgaacggcgccattgaactttccctt
cccgctccgcaggcggcagggctggcctggcggccgagctcggtcgcgcttggttccggt
cctttccagggcgccgtgcgcggcacctcctttgccggcaacacgcgcgaatatctgctt
gatacgccgctcgggcgggtcaaggccgaggtggatgcaagcctgccgccgcacgaaatc
ggcgcgtcactttccttcgacctaccgcttgcggcggctgcaactctcacgcgcttcggg
tga
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