Rhizobium gallicum bv. gallicum: RGR602_CH03960
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Entry
RGR602_CH03960 CDS
T03539
Name
(GenBank) LuxR family transcriptional regulator protein
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga02020
Two-component system
rga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGR602_CH03960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGR602_CH03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rga03000
]
RGR602_CH03960
Transcription factors [BR:
rga03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RGR602_CH03960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AJD43257
UniProt:
A0A0B4X9P6
LinkDB
All DBs
Position
complement(4021038..4021778)
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AA seq
246 aa
AA seq
DB search
MNIHSLVQLLVVIEECTKPETVVEELRRIVHSYGFEYYGLLRHLKQSQDPWGLVLAGHWP
EKWPQTYVAKKYVLIDPTVRYLAQAQRPFRWKESLAAYRRDPHQRRMEQMMRDADAHGLR
DGYIFPIHGKSGVLGNLSVGGEPVELSPVEMSLFETVARKAFWRLLDLKGEAKALESASL
LKMPLTRRELEILHYLADGLTSMEISKVLSISNHTVDWYMNGLQDKLKAKNRQQAVALAF
RHGLVI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattcattctttggttcaattgctcgtcgtcatagaggaatgcacgaagcccgaa
accgtcgttgaggaacttcggcggatcgttcattcctatggcttcgaatattatggattg
ctgcgtcatttgaagcagagccaagatccctggggtctcgtacttgccgggcattggccc
gagaagtggccgcaaacatatgttgcaaaaaaatatgtcctcatagatccaacagtccgg
tatctggcgcaggcgcaaaggccatttcgatggaaggaaagcctagccgcctaccgccgc
gatccgcaccagcggcgaatggaacagatgatgagggatgccgatgcccacggcctgcgc
gacggttacatcttccccattcacggcaagagcggcgtgctcggaaacttgagcgtcggc
ggcgagcctgtcgaattgtcgccggtggagatgtcattgttcgaaactgttgcccgcaaa
gcgttctggcggctgcttgatctcaagggcgaagcgaaggcactcgaaagcgcttcgttg
ctcaaaatgccgctgacgcgccgcgagctcgaaatcctgcactatttagccgacggcctg
acctcgatggagatcagcaaggtgctcagcatatcgaaccacacggtcgattggtatatg
aatgggctgcaggacaagctgaaggccaagaaccgccagcaggcggtggcgctggctttc
cggcacgggctcgttatctaa
DBGET
integrated database retrieval system
