KEGG   Rhizobium gallicum bv. gallicum: RGR602_CH04050
Entry
RGR602_CH04050    CDS       T03539                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rga  Rhizobium gallicum bv. gallicum
Pathway
rga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RGR602_CH04050 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rga03021]
    RGR602_CH04050 (rho)
   03019 Messenger RNA biogenesis [BR:rga03019]
    RGR602_CH04050 (rho)
Transcription machinery [BR:rga03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RGR602_CH04050 (rho)
Messenger RNA biogenesis [BR:rga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RGR602_CH04050 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 NACHT AAA_25 S1CSD-TOTE-2 DUF6360 AAA
Other DBs
NCBI-ProteinID: AJD43346
UniProt: A0A0B4X825
LinkDB
Position
complement(4130237..4131502)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKVLASQDVEIIGEGVVEV
LQDGFGFLRSPNANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELDVPTSKDLSSRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNPDFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagtaaatccccgaccgatcttctggcgttc
gccgaatcgctcgaggtcgaaaatgcaagcaccatgcgcaaacaggaactgatgtttgcg
atcctgaaggttctcgcgagccaggatgtcgagatcatcggcgaaggcgtcgtggaagtc
ctgcaggatggtttcggcttcctgcgttcgccaaacgctaactatctgccgggtccggac
gatatttatatttccccttcgcagatccgccgattctcgctgaaaactggcgatacggtc
gagggacccatccgcggtccgaaggaaggtgagcgctattttgctctgctcaaggtgaat
acgatcaatttcgacgatccggaaaagatccgtcataaggttcacttcgacaatctgacg
ccgctttatccgaatgaacgattcaagatggaactcgacgttccgacatcgaaggatctg
tcttcgcgcgtcatcgatctcgtggcgccgcttggcaagggccagcgtggtctcatcgtc
gcgccgcccagaaccggtaagaccgtccttctgcagaatattgcgcactcgatcaccgca
aatcatccggaatgctacctgatcgttctgctgatcgacgaacgtcctgaggaagtgacg
gacatgcagcgttcggtgcgcggtgaagtgatttcttccacattcgacgagccagctgtg
cgtcacgtgcaggtggccgagatggtgatcgaaaaggcaaagcggcttgtcgaacacggc
cgcgatgtcgtcatcctgcttgattcgatcacgcgcctcggacgcgcctacaacaccgtg
gtgccctcttccggtaaggttctgacaggtggtgtcgatgcaaacgctctgcaacggccg
aagcggttcttcggcgctgcccgtaacatcgaagaaggcggctcgctgacgattatcgcg
acggcactcattgataccggcagccgtatggatgaagtcatcttcgaagaattcaagggc
accggtaactcggaaatcgttctggatcgtaaggtagcggacaagcgcatcttcccggcg
atggatattctgaagtccggcacgcgcaaggaggatctgcttgtcccgcgtcaggacctg
cagaaaatcttcgtgcttcgacgtattcttgcccccatgggaacaaccgacgcgatcgag
tttcttatcgacaagctgaagcagacgaagagtaatccggatttcttcgagtcgatgaac
acgtaa

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