Rhizobium gallicum bv. gallicum: RGR602_PB00244
Help
Entry
RGR602_PB00244 CDS
T03539
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein NifA
KO
K02584
Nif-specific regulatory protein
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGR602_PB00244 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rga03000
]
RGR602_PB00244 (nifA)
Transcription factors [BR:
rga03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGR602_PB00244 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA_2
Mg_chelatase
AAA
MCM
AAA_3
AAA_16
BrxC_BrxD
AAA_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJD43781
UniProt:
A0A0B4X9H2
LinkDB
All DBs
Position
pRgalR602b:complement(222397..224142)
Genome browser
AA seq
581 aa
AA seq
DB search
MVHMPARSVDGVEALPALPAKPMRQADILLSGIYEISKVLTAHARLEITLANVVNILSSF
LQIRHGAIVVLAAEGQPEITATADIPRPSQSADRGVIPKAVIDHIVTTGAPFVIKDVGKS
ELFQADLQTSRSSGTVPIAFIGVPVKAEKKILGTLSIDRVRNGTTIFPSDEDVCFLTMVA
NLVGRTIQLHRILNLNGQPLIGEQQKPEKSLIAERSAPGRHPHVKIDGIIGESPALKQVV
ETVSVVARTNTTVLLRGESGTGKEFFAQAIHELSPRRKKSFVKLNCAALPESVLESELFG
HEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLE
VDVRLICATNKNLEMAVANGEFRADLYYRISVVPIVLPPLRERPGDIPRLAKVLLNRFNK
ENHSELAFAPSALDVMSQCYFPGNVRELENCVRRTATLARSRTIVPSDFACKNSQCLSSL
LWKGIDGSHGGNAIDELAKNNVMPAASPHSARCIGVSPVKACDPNDPGCPAMGSRLTERD
RLIDAMEKAGWVQAKAARILGLTPRQVGYALRRHRIEVKKL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggttcacatgcccgcgcgatcggtcgatggggtagaagctctgcctgcactccctgct
aaaccgatgcgccaagcggacatcctgctcagcggaatctatgagatatcgaaggtcctg
accgcccatgcccggctagagatcacgcttgccaatgtcgtgaacatcctctcttcgttt
ctgcaaatacggcacggagcaatcgttgtcctggccgcagaaggacagcccgagattacc
gcaactgccgacattccccgcccctctcaatcagccgatcgcggcgtcataccgaaggcc
gtaatagaccatatcgtcacaacgggtgcgcccttcgtcataaaggatgttggcaagtcc
gaactatttcaggctgatcttcaaacgtctcggagcagcggcaccgtcccaattgccttt
attggcgtcccggtaaaggctgagaagaaaattcttggcacgttatcgatcgaccgcgtc
aggaatggcaccaccatcttcccctccgacgaggacgtatgctttctaaccatggtcgcc
aacctcgtcggtcggaccatccagcttcatcgcattctgaacctgaatggtcagccgctt
atcggggaacaacagaaaccggagaaatcgctcatcgcggagaggagcgccccgggccgg
catccacacgtcaaaatcgacgggattatcggggagagtcctgccctcaagcaggtggtc
gaaaccgtctcagtcgtggcaaggacgaataccaccgtgcttctgcggggcgaaagcggc
accggcaaggagttctttgcacaggcgatccatgagctttcacctcgcaggaagaagtcg
ttcgtcaaattgaactgcgccgcgctgcctgagagcgtcctggaatcggagctgtttggg
catgaaaagggtgccttcaccggggctatcgcgcagcgcgcgggacgcttcgaattggcg
aatggcggaaccctgttgcttgatgagatcggcgagatttcgccggcctttcaagccaag
ctgttgcgcgtcttgcaggagggcgaactggagcgggtcggcggcaccaagacgctggag
gttgacgtccggctcatatgcgccacgaacaagaacctcgagatggctgttgcaaacggc
gagttcagggccgacctttattaccgcatcagcgtagtgccaattgtcctgccgccgctt
cgagagcgacccggcgatattccacgccttgcgaaagttctccttaaccgattcaacaag
gagaaccatagcgagctcgcattcgcgccgtcggcgcttgacgtgatgtcgcaatgctac
ttccctggcaacgtccgcgagctcgaaaactgcgtgcgaaggacggccacgcttgcgcgt
tcaaggacgatcgttccgtcggatttcgcctgcaagaacagccagtgcctttcttcgctc
ctctggaaaggcatcgacgggtcgcacggcggcaatgccatcgatgagcttgccaagaac
aatgtgatgccggctgcatcgccgcactcggcccggtgcatcggcgtttcgcccgtcaag
gcctgtgatccgaacgatcccggttgtcccgcaatggggtcgcgtctgacggaacgggac
cggctgatcgatgcgatggagaaggccggctgggttcaggccaaggcggctcgtatcctc
ggcctgacgccgcgtcaggtcggctatgctctgcgccggcatcgtatcgaggtgaagaag
ctgtaa
DBGET
integrated database retrieval system
