Rhizobium gallicum bv. gallicum: RGR602_PC00621
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Entry
RGR602_PC00621 CDS
T03539
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RGR602_PC00621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_PC00621
DNA repair and recombination proteins [BR:
rga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RGR602_PC00621
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ferredoxin_N
Motif
Other DBs
NCBI-ProteinID:
AJD44660
UniProt:
A0A0B4XCZ3
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All DBs
Position
pRgalR602c:complement(659040..659939)
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AA seq
299 aa
AA seq
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MVTPRANWKGYIKFGEVAFPVALYTAASSSERIAFNTLNRKTGNRVRREFVDSETGDTVE
REAQVKGFEIEDGRYVVLEPEEVAAAIPNSDKTLKVEAFIPCDEVDDVYFDKPYYLAPDK
MGSDAYKLLRDGMKQAKVAAVARTVLFRRLRTVLIRPHGKGLIGSTLNYDYEVRSSQKAF
EEMPDLKIEGEMLELAKHIINTKKGEFDPKQFDDRYEEAVAELVKAKMEGRALPKKKAPP
ASKPSDLLQALRESAGMSTPAKGKRTAANANAGKGRQKANRAAASAARSTGGAHQRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttacaccgcgagcgaattggaagggctacatcaagttcggcgaagttgcgtttccg
gtcgcgctttacacggccgcctcgtcatccgagcggatagccttcaataccttgaatcgc
aagaccggcaatcgcgtccgccgcgaattcgtcgatagcgaaaccggcgatacggtggag
cgcgaggcacaggtgaagggcttcgagatagaggacgggcgctatgttgtcctcgaaccg
gaagaagtcgcagcggcgattccaaatagcgacaagacactgaaggtcgaggcattcatt
ccttgcgacgaggtcgacgacgtctatttcgacaaaccgtattatcttgcgcccgacaag
atgggcagcgatgcgtacaagctcctgcgtgacggcatgaaacaagccaaggtcgccgca
gtcgctcgcacggtcctgttccggcgcctgcgcaccgtacttatccgaccgcacggcaag
ggcctgattggatcgacgttgaactacgactacgaggtgcgttcatcgcagaaggcgttc
gaggagatgccggacctgaagattgaaggcgagatgctggagctggcaaagcacatcatc
aacaccaagaagggtgagttcgacccgaaacagttcgacgaccgctacgaagaggcggtg
gccgagctcgtgaaagcaaagatggaaggccgcgcgctgccgaagaagaaggcaccccca
gcatccaaaccgagcgatcttctacaggccctgcgtgaaagtgccggaatgtccacgcct
gccaagggcaaacgcaccgcggccaacgccaacgccggcaaaggccggcaaaaagccaat
cgggccgccgcatccgcggcccgcagcactggtggcgcccaccagcgtcgtgctggctga
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