Rubrivivax gelatinosus: RGE_05920
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Entry
RGE_05920 CDS
T01803
Name
(GenBank) putative TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rge02000
]
RGE_05920
Transporters [BR:
rge02000
]
Other transporters
Pores ion channels [TC:
1
]
RGE_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
SlipAM
Motif
Other DBs
NCBI-ProteinID:
BAL93937
UniProt:
I0HLQ0
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All DBs
Position
616597..618663
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AA seq
688 aa
AA seq
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MLALAIAAAVAVPARAEQIIVTANKIEERLQDVPASITVLDGEALAQRGLHSIADVVRLV
PNMSSSFVFSEEVNLRGLNASTFTNLNPVVLYVDGVPYSSRYAYDTLLEGVERVEVLRGP
QGTLYGKDSIGGVINVVTRAPGPRWQGRAGVEVANQSGRAADFSLSGPLAAPGLTLALAG
RVAGDDGWIDNHHGGTSENANDRAERRLALTLGWAPSERLDIKLALTHDADRRDWIDGGL
APSGTSFAAYDRDDAENADYDVATRTKTITNAQALRLRWRLGDGRELNAVTTHKTLGVQG
AYDRDWGSLALYDGLEQFQYSRFETWTQELRLSGGAPGGTRWVTGVYAERDRYRNTRYGM
QYPGEAMGEPFGPGVDLDLDDPSTTRTTTAAVFGQAVVALAPRWELTLGARAQTVDKAFV
SDYRLGPVGGSGATVYALDAEHRWNALLPKAALRWQATPEWSVWASVAKGYIPGGYNFWT
SSAVESENRFEPQTSLNYELGLRSAPGRLQLSAALFYLDIRDIHVYSYDAGSGQIFTSNA
GRGHSYGAELEANYVLSDRWELDAALGATHAVYDEHGSDAAEGANIERTPSYTLAVGLQY
HDADGRYARVDLRGQGRRWFDAANTRRSGAWTAVDLRAGWQRGAWDVYAWVRNAGDKQVV
SSVSEMDVGDLVVYGEPRRFGLGARWRF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccctcgcgatcgccgccgcggtcgccgtgccggcccgggccgaacagatcatc
gtcaccgccaacaagatcgaggagcggctgcaggacgtgcccgccagcatcaccgtgctc
gacggcgaggcgctggcgcagcgcgggctgcactcgatcgccgacgtcgtgcggctggtg
cccaacatgtcctcgtccttcgtgttctcggaggaggtcaacctgcgcgggctcaacgcc
tcgaccttcaccaacctgaacccggtggtgctctacgtcgacggcgtgccgtactcgagc
cgctacgcctacgacacgctgctcgagggcgtcgagcgcgtggaggtgctgcgcggcccg
cagggcacgctctacggcaaggattcgatcggcggcgtgatcaacgtcgtcacgcgcgcg
ccgggcccgcgctggcaggggcgggccggggtcgaagtcgccaaccagagcggccgcgcc
gccgacttctcgctgtccgggccgctggccgcgccgggcctgacgctggcgctggccggc
cgcgtcgccggtgacgacggctggatcgacaaccaccatggcggcacgagcgaaaacgcc
aacgaccgcgccgagcgccgcctcgcactgacgctgggctgggcgccgagcgagcgcctg
gacatcaagctcgcgctgacccacgacgccgaccgtcgcgactggatcgacggtggcctg
gcgcccagcggcacctcgttcgccgcctacgaccgcgacgacgccgaaaacgccgactac
gacgtcgccacgcgcaccaagaccatcaccaacgcccaggcgctgcgcctgcgctggcgt
ctgggcgacggccgcgagctgaacgcggtgacgacgcacaagacgctgggcgtgcagggc
gcctacgaccgcgactggggatcgctggcgctctacgacgggctcgagcagttccagtac
tcgcgcttcgagacctggacgcaggagctgcgcctgtccggcggcgcgcccggcggcacc
cgctgggtcaccggcgtctatgccgagcgcgaccgctaccgcaacacgcgctacggcatg
cagtacccgggcgaggcgatgggcgagcctttcggccccggcgtcgacctggacctggac
gatccgtcgacgacacgcaccaccaccgccgcggtcttcggccaggccgtcgtcgcgctc
gccccgcgctgggagctgacgctgggcgcgcgggcgcagaccgtggacaaggccttcgtc
tccgactaccgcctcgggccggtgggcggcagcggcgcgacggtctacgcgctcgacgcc
gagcaccgctggaacgcgctgctgcccaaggccgcgctgcgctggcaggccacgcccgag
tggagcgtctgggcttcggtcgccaagggctacatccccggcggctacaacttctggacc
tccagcgccgtcgagtccgagaaccgcttcgagccgcagacctcgctgaactacgagctc
ggcctgcgttcggcaccgggccggctgcagctgtcggcggcgctgttctacctggacatc
cgcgacatccacgtctactcgtacgacgccggcagcggccagatcttcacctccaacgcc
ggccgcggccactcctacggtgccgagctggaggccaattacgtgctctccgaccgctgg
gagctcgacgccgcgctcggcgccacgcacgcggtctacgacgagcacggcagcgacgcg
gccgagggcgcgaacatcgagcgcacgccgtcgtacacgctggccgtcggcctgcagtat
cacgacgccgacgggcgctacgcgcgcgtcgacctgcgcggccagggccggcgctggttc
gacgccgccaacacccggcgcagcggcgcctggaccgcggtcgacctgcgcgccggctgg
cagcgcggcgcctgggacgtctacgcctgggtgcgcaacgccggcgacaagcaggtcgtc
agcagcgtcagcgagatggacgtcggcgacctcgtcgtctacggcgaaccgcggcgcttc
ggcctcggcgcgcgctggcgcttctga
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