Rubrivivax gelatinosus: RGE_06620
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Entry
RGE_06620 CDS
T01803
Symbol
nirDL
Name
(GenBank) nitrite reductase heme biosynthesis D/L protein,putative
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00860
Porphyrin metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE_06620 (nirDL)
Enzymes [BR:
rge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
RGE_06620 (nirDL)
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Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
BAL94007
UniProt:
I0HLX0
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Position
678803..679792
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AA seq
329 aa
AA seq
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MDSSAELLNPWQQRFPLERTPFAAIAAATGRPAPELLAAFREAQRSGALSRIGGIFGAGA
GGAGLLVAMAVPPARLDTVAVRVSAEPQVNHNYEREHTLNLWFVVNAADAAAVELVVTRL
EHATGLAALRLPLLRPYRIDLGFDLRARTAPEAMAPQRRAPAVPAADRPLAALVEQGLPL
VARPYDLWARELGREPEAVLATLGGWLIDGTLKRFGAIVRHHELGFAANAMAVFDVPDGE
VDARGDTLAQVPGVTLAYRRARGEGWPFNLYCMVHGRDRDAVHAVLERAAVAAGLQQVPR
SVLFSCRRFKQTGASRFGAPVLESAHAHA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagcgccgaactgctcaacccctggcagcagcgtttcccgctcgaacgcacg
cccttcgccgccatcgccgcggccaccggccgcccggcgcccgagctgctggcggccttc
cgcgaggcgcaacgcagcggcgcgctgtcgcgcatcggcggcatcttcggcgccggtgcc
ggcggtgccgggctgctggtcgcgatggccgtgccgccggcgcggctggacacggtggcg
gtgcgcgtctcggccgagccgcaggtcaaccacaactacgagcgcgagcacacgctgaac
ctgtggttcgtcgtcaacgccgccgacgccgcggcggtggaactcgtcgtcacgcgcctg
gaacacgccaccggcctcgcggcgctgcgcctgccgctcttgcgcccgtaccgcatcgac
ctcggcttcgacctgcgcgcgcgcaccgcgcccgaggcgatggcgccgcagcgccgcgcg
ccggcggtgcccgccgccgaccgaccgctggccgcgctggtcgagcaaggcctgccgctg
gtggcgcggccttacgacctctgggcgcgtgaactcggccgcgagcccgaggccgtgctc
gccacgctgggcggctggctgatcgacggcaccctgaagcgtttcggcgccatcgtgcgc
caccacgaactcggtttcgccgccaacgcgatggccgtgttcgacgtgcccgacggcgag
gtcgacgcgcgcggcgacacgctggcgcaggtgcccggcgtcacgctggcctaccgccgc
gcgcgcggcgaaggctggcctttcaacctgtactgcatggtgcacggccgcgaccgcgac
gcggtgcatgccgtgctcgagcgcgccgccgtggccgccgggctgcagcaggtcccgcgt
tcggtgctgttctcgtgccggcgtttcaaacagaccggtgcctcgcgtttcggcgccccc
gtcctggagtccgcgcatgctcacgcctga
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