Rubrivivax gelatinosus: RGE_07750
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Entry
RGE_07750 CDS
T01803
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00061
Fatty acid biosynthesis
rge00071
Fatty acid degradation
rge01100
Metabolic pathways
rge01212
Fatty acid metabolism
rge02024
Quorum sensing
rge04146
Peroxisome
Module
rge_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGE_07750
00071 Fatty acid degradation
RGE_07750
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGE_07750
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE_07750
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rge01004
]
RGE_07750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rge04147
]
RGE_07750
Enzymes [BR:
rge01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGE_07750
Lipid biosynthesis proteins [BR:
rge01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RGE_07750
Exosome [BR:
rge04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGE_07750
Exosomal proteins of breast cancer cells
RGE_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAL94118
UniProt:
I0HM81
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All DBs
Position
complement(804102..806048)
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AA seq
648 aa
AA seq
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MPTTFPRLLLEHAKRRPQAPALREKVYGIWQTLTWSELLALVRALAGGFAAAGIARGEHV
VVVGENRPRLYASMLALQSIGAVPVPLYQDAASPEYAFPITNADVRCAVVEDQEQVDKLL
ELRETCPRLERLWYDDPRGLRKYAERGLESLDTLIEAGRAHDAANPGAFDAAVEAGTPED
VAAMFFTSGTTGNPKGVVHTHFSLLDRAGAGRDFDRLSEHEEVLAYLPPAWIGQNIFSYA
QWLACGYVVNCPESQATVTIDLKEIGPTYYFAPPRVFEALLTSVTIRMEDASAPKRWMYR
RAMAVARRVGPQRMDGKAIGLGDRIAYALGNLFVYGPLRNTLGFSRVRVAYTAGEAIGPD
LFSFYRSIGINLKQLYGSTETAVFVCLQPDHEVRADTVGVPIAGVEIRVAGNGEILVKSP
GLLKEYYKNPAATAEVLDAEGWYRTGDAGFLDAHGHLKIIDRAKDVGRLAGGANDGAMFA
PKYVENKLKFFPFVKEAVAFGDGREKVCAFVNIDFEAVGNWAERRNLPYAGYTDLAAKPQ
VLELVRECVEQVNADLAADALLAGSQIHRFLVLHKELDADDGELTRTRKVRRGFIAEKYA
VLVDALYGGRSEQYIETAVKFEDGRSGSVSATLAILDSKVFPATRKAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgacttttccgcgtctgttgctggagcatgcgaagcgccgcccgcaggccccg
gcgctgcgcgagaaggtctacggcatctggcagacgctcacctggagcgagctgctggcg
ctggtgcgggcgctggccggcggtttcgcggcggcgggcatcgcacgcggcgagcacgtc
gtcgtcgtcggcgagaaccggccgcggctgtatgcctcgatgctcgcgctgcagtccatc
ggcgcggtgccggtgccgctgtaccaggacgcggcctcgcccgaatacgccttcccgatc
accaacgccgacgtgcgctgcgccgtcgtcgaggaccaggagcaggtcgacaagctgctc
gagctgcgcgagacctgcccgcggctggagcgcctctggtacgacgacccgcgcggcctg
cgcaagtacgccgaacgcggcctggagtcgctggacacgctgatcgaagccggccgcgcg
cacgacgccgcgaaccccggcgccttcgatgccgcggtcgaagccggcacgccggaagac
gtcgcggcgatgttcttcacctcgggcacgaccggcaacccgaagggcgtggtgcacacc
cacttctcgctgctcgaccgcgccggcgccggccgcgacttcgaccgcctgagcgaacac
gaggaagtgctggcctacctgccgccggcctggatcggccagaacatcttcagctacgcc
cagtggctggcctgcggctacgtggtcaactgcccggagtcgcaggccacggtgacgatc
gacctgaaggagatcggcccgacctactacttcgcgccgccgcgtgtcttcgaggcgctg
ctgaccagcgtgacgatccggatggaagacgcctcggcgcccaagcgctggatgtaccgg
cgcgcgatggcggtggcacgccgtgtcggcccgcagcggatggacggcaaggcgatcggc
ctgggcgaccgcatcgcctacgcgctgggcaatctcttcgtctacggcccgctgcgcaac
acgctgggcttctcgcgcgtgcgagtggcctacaccgccggcgaggcgatcgggccggac
ctgttcagcttctaccgctcgatcggcatcaacctgaagcagctctacggctcgaccgag
accgcggtcttcgtctgcctgcagcccgaccacgaggtgcgcgccgacaccgtgggcgtg
ccgatcgccggcgtcgagatccgcgtcgccggcaacggcgagatcctggtgaagagcccc
gggctgctgaaggagtactacaagaacccggcggccaccgccgaggtgctggacgccgaa
ggctggtaccgcaccggcgacgccggcttcctcgacgcccacggccatctgaagatcatc
gaccgcgccaaggacgtcggccggctggccggcggcgccaacgacggcgcgatgttcgcg
cccaagtacgtcgagaacaagctgaagttcttccccttcgtcaaggaggcggtggccttc
ggcgacgggcgcgagaaggtctgcgccttcgtcaacatcgacttcgaggcggtgggcaac
tgggccgaacgccgcaacctgccctatgccggctacaccgacctggcggccaagccgcag
gtgctggagctggtgcgcgagtgcgtcgagcaggtcaacgccgacctcgccgccgacgcg
ctgctggcgggcagccagatccaccgtttcctcgtgctgcacaaggagctcgacgccgac
gacggcgagctgacgcgcacgcgcaaggtgcggcgcggcttcatcgccgagaagtacgcg
gtgctggtcgacgcgctctacgggggccgcagcgagcagtacatcgagaccgcggtgaag
ttcgaggacgggcgcagcggcagcgtctcggcgacgctggcgatcctcgacagcaaggtc
ttcccggcgacccgaaaggcggcttga
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