Rubrivivax gelatinosus: RGE_08130
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Entry
RGE_08130 CDS
T01803
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00300
Lysine biosynthesis
rge00470
D-Amino acid metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01230
Biosynthesis of amino acids
Module
rge_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGE_08130 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGE_08130 (lysA)
Enzymes [BR:
rge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RGE_08130 (lysA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAL94156
UniProt:
I0HMB9
LinkDB
All DBs
Position
complement(845209..846483)
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AA seq
424 aa
AA seq
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MTLPGHPHLARDAQGELRLEGHSLADLARRHGTPLYVYSRAAMLDALAGYQRALEGLPHL
ICYAMKANSNLAVLQTFARAGCGFDIVSGGELERVLAAGAEPSKIVFSGVGKTAAEMRRA
LEVGVHCFNVESLGELERLAEVAAAMGRRAPVSLRVNPDVDAGTHPYISTGLKDNKFGIP
HDEALAAYRRAAALPSLQVIGIDCHIGSQITQLEPYLDALGRLLDLVEAVEAEGIALAHV
DVGGGLGITYTDEAPPAPETLVRALAELMRARGHGHRELIVEPGRSLVGNAGVLLAEVQY
LKPGETKNFCIVDAAMNDLVRPAMYEAWMAIEPCRPSAGTAAATWDVVGPVCESGDWLGR
DRRLAVAPGDIVAVLSAGAYGMAMAGNYNSRPRAAEIMLDGDAVHVVREREDARALFALE
RLLD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgcccggccacccccacctggcgcgcgacgcccagggcgagctgcggctggaa
ggccattcgctcgccgacctggcgcgccgccacggcacgccgctgtacgtctactcgcgc
gcggcgatgctcgacgcgctggcgggttaccagcgtgcgctcgaaggcctgccgcacctg
atctgctacgcgatgaaggcgaactccaacctcgccgtgctgcagaccttcgcacgcgcc
ggctgcggcttcgacatcgtctccggcggcgagctggaacgtgtgctggccgccggagcc
gagccttcaaagatcgtgttctccggtgtcggcaagaccgccgccgagatgcgccgcgcg
ctcgaggtcggcgtgcactgcttcaacgtcgagagcctgggcgaactcgaacggctggcc
gaggtcgccgcagcgatgggccggcgcgcgccggtcagcctgcgcgtcaaccccgacgtc
gacgccggcacccacccctacatctcgaccgggctgaaggacaacaagttcggcatcccg
cacgacgaagcgctggccgcctaccggcgcgccgccgcgctgccctcgctgcaggtcatc
ggcatcgactgccacatcggctcgcagatcacgcagctcgagccctatctcgacgcgctc
ggccgcttgctcgacctggtcgaggcggtggaggccgagggcatcgcgctggcccacgtc
gacgtcggcggcggcctgggcatcacctacaccgacgaggccccgcccgcgcccgagacg
ctggtgcgcgccctggccgagctgatgcgcgcgcgcggccacggccaccgcgagctgatc
gtcgagcccgggcgctcgctggtcggcaacgccggcgtgctgctggccgaggtgcagtac
ctgaagcccggcgagacgaagaacttctgcatcgtcgacgcggcgatgaacgacctggtg
cgcccggcgatgtacgaggcctggatggcgatcgagccctgccggccgagcgccggcacc
gcggcggccacctgggacgtcgtcggcccggtctgcgaatcgggcgactggctgggccgc
gaccgcaggctggccgtggcgccgggcgacatcgtcgccgtgctgtccgccggcgcctac
ggcatggcgatggccggcaactacaacagccggccgcgcgccgccgagatcatgctcgac
ggcgacgccgtgcacgtcgtgcgcgagcgcgaggacgcccgggcgctgttcgcgctggaa
cgcctgctcgactag
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