Rubrivivax gelatinosus: RGE_09160
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Entry
RGE_09160 CDS
T01803
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00071
Fatty acid degradation
rge00362
Benzoate degradation
rge00650
Butanoate metabolism
rge01100
Metabolic pathways
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
rge01212
Fatty acid metabolism
Module
rge_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RGE_09160
09103 Lipid metabolism
00071 Fatty acid degradation
RGE_09160
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGE_09160
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RGE_09160
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Shikimate_DH
Peptidase_S49
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
BAL94257
UniProt:
I0HMM0
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Position
954285..956681
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AA seq
798 aa
AA seq
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MNRFHVRKVAVLGAGVMGAQIAAHLVNVNVPVVLFDLPAKEGPKNGVVTKAVDGLKKLKP
APLGVPEDAARIVQANYEEHLHLLAECDLVIEAIAERMDWKLALYEKIAGSLAPHAIVAS
NTSGLSITKLAEALPESIRPRFCGIHFFNPPRYMYLVELIATPATQPEVLDQLEAFVTTA
VGKGVVRAKDTPNFIANRVGIAGMLATIHEAEKFGLSVEVVDDLTGKKLGRASSGTFRTA
DVVGLDTMAHVIKTLQDNLAEDPFYPSYATPPVLKALIDKGALGQKSGAGFYRKDGKTIL
RLDFASGEYVPSTGKADEIVARMLKKAPADRLKLLRESSNAQAQFLWAILRDAFHYAAVH
LEAIADNARDVDFAMRWGFGMQQGPFELWQAAGWKQVAEWVKADIEAGKALSSAPLPAWV
FEGPVAEAGGVHTAAGSWSPSRQAFVPRSALAVYGRQHFPENVLGSGAKAALESGTEVFR
NEDVRVWTLDGEVLILSITCKLHLISQAVTEGLVKAIELAEAGYKALVIWSPDDVFSAGA
NLESMLPVFMKSGSKGIAPEVKKLQDAVLKMRYAQVPVVAAMRGLALGGGCELSVYASRR
VAAMETYVGLVEVGVGLLPAGGGLTYIARRAAQMASAGNANADILKFLTDGFTNAAMAKV
GTSAIESRKLGYLIDGDVIVPNKDELLYVATAQAKAMADSGWRAPAKVAFPAAGRNALAT
IKGQLANMRDGGFISAHDFHIATLIAEVCCGGDVDAGSLVTEEYLMTMERERFCSLLDNP
KTQERIMGMLQTGKPVRN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgattccacgtccgcaaggtcgccgtgctcggcgccggcgtgatgggcgcgcag
atcgccgcccatctggtcaacgtcaacgtgccggtcgtgctgttcgacctgccggccaag
gaaggcccgaagaacggcgtcgtcaccaaggccgtcgacggcctgaagaagttgaagccc
gcgccgctgggcgtgcccgaggacgccgcgcgcatcgtccaggccaactacgaggagcac
ctgcacctgctcgccgaatgcgacctcgtcatcgaggccatcgccgagcgcatggactgg
aagctggcgctgtacgaaaagatcgccggctcgctggcgccgcacgccatcgtcgccagc
aacacctcgggcctgtcgatcaccaagctcgccgaggcgctgccggaatcgatccgtccg
cgcttctgcggcatccacttcttcaacccgccgcgctacatgtacctcgtcgagctgatc
gccaccccggcgacgcagcccgaggtgctggaccagctcgaggccttcgtcaccaccgcg
gtcggcaagggcgtcgttcgcgccaaggacacgccgaacttcattgccaaccgcgtcggc
atcgccggcatgctggcgacgatccacgaagccgagaagttcggcctctcggtcgaggtc
gtcgacgacctgaccggcaagaagctcggccgcgccagctcgggcaccttccgcaccgcg
gacgtggtcggcctggacacgatggcgcacgtcatcaagacgctgcaggacaacctcgcc
gaggaccctttctaccccagctacgcgacgccgccggtcctcaaggcgctgatcgacaag
ggcgcgctggggcagaagtcgggcgccggcttctaccgcaaggacggcaagaccatcctg
cggctggacttcgccagcggcgagtacgtgccgtccaccggcaaggccgacgagatcgtc
gcgcgcatgctgaagaaggcgccggccgaccgtctgaagctgctgcgcgagagcagcaat
gcgcaggcgcagttcctgtgggccatcctgcgcgacgccttccactacgccgcggtgcat
ctggaagcgatcgccgacaacgcgcgcgacgtcgacttcgcgatgcgctggggcttcggc
atgcagcagggcccgttcgagctctggcaggccgccggctggaagcaggtcgccgaatgg
gtcaaggccgacatcgaagcaggcaaggcgctgtcgtcggcgccgctgccggcctgggtc
ttcgagggcccggtcgccgaggccggcggcgtgcacaccgccgccgggtcgtggagcccg
tcgcgccaggccttcgtgccgcgcagcgcgctggcggtctacggccgtcagcacttcccg
gagaacgtgctcggctcgggcgccaaggccgcgctcgaatccggcaccgaggtcttccgc
aatgaagacgtgcgcgtctggacgctcgacggcgaggtgctgatcctcagcatcacctgc
aagctgcacctgatcagccaggcggtgaccgagggcctggtgaaggccatcgaactcgcc
gaagccggctacaaggcgctggtgatctggtcgccggacgacgtgttctcggccggcgcc
aacctggaatcgatgctgccggtgttcatgaagtccggctccaagggcatcgcgcccgag
gtcaagaagctgcaggacgcggtgctgaagatgcgctacgcgcaggtgccggtggtcgcg
gcgatgcgcggcctggcgctgggcggcggctgcgagctgtcggtctacgcctcgcgccgc
gtcgcggcgatggaaacctacgtcggcctggtcgaggtcggtgtcggcctgctgccggcg
ggcggcggcctgacctacatcgcgcgccgcgccgcgcagatggcctcggccggcaacgcc
aacgccgacatcctgaagttcctgaccgacggcttcaccaacgccgcgatggccaaggtc
ggcaccagcgccatcgagtcgcgcaagctcggctacctgatcgacggcgacgtcatcgtg
ccgaacaaggacgagctgctgtacgtcgccacggcccaggccaaggcgatggccgacagc
ggctggcgcgcgccggcgaaggtggccttcccggcggcaggccgcaacgcgctggcgacg
atcaagggccagctcgccaacatgcgtgacggcggcttcatcagcgcgcacgacttccac
atcgcgacgctgatcgccgaggtctgctgcggcggcgacgtcgacgccggctcgctggtg
accgaggagtacctgatgacgatggagcgcgagcgcttctgctcgctgctggacaacccc
aagacccaggaacgcatcatgggcatgctccaaacgggcaagccggtccggaactga
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