Rubrivivax gelatinosus: RGE_11560
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Entry
RGE_11560 CDS
T01803
Name
(GenBank) sodium ion-translocating decarboxylase, beta subunit
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00362
Benzoate degradation
rge00620
Pyruvate metabolism
rge00650
Butanoate metabolism
rge01100
Metabolic pathways
rge01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RGE_11560
00650 Butanoate metabolism
RGE_11560
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGE_11560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rge02000
]
RGE_11560
Enzymes [BR:
rge01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
RGE_11560
Transporters [BR:
rge02000
]
Other transporters
Primary active transporters [TC:
3
]
RGE_11560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
BAL94497
UniProt:
I0HNB0
LinkDB
All DBs
Position
complement(1207792..1208964)
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AA seq
390 aa
AA seq
DB search
MFDQLGPFFQALLAQTGAVHLSWGNVVMILVGATMVYLAIAKHYEPLLLVGIGFSCIVAN
VPGPPDDVPGGQAISALLYVVKEGGLFHYAYEGVAKLIIPPLIFLGVGAMTDFGPMIANP
RLVILGAGAHLGIFVALILAKLCGFTLAEAGAIGIIGGADGPMAIFVTMKLAPHLLGPIS
VAAYSYMALMPLIQPPVMRLLTTKAERQITMKQLRTVGKAEKIAFPIVIAVIVNLFFPPV
APLITMLMLGNLLKECGVTERLAKTAAGGLMNVIVLVLTVAIGSTMAADKFLNWNTLLIV
LLGLVAFVFGTASGVITAKVMNLFLKDKINPLIGSAGIASVPIAARVSHIVANQENPKNF
LIYHAMGPNLAGVFGTAISGGILLALLGAG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatcagctcggcccgttcttccaggcgctgctggcgcagaccggcgccgtgcac
ctgagctggggcaacgtggtgatgatcctcgtcggcgcgacgatggtctatctggcgatc
gccaagcactacgagccgctgctgctggtcggcatcggcttctcgtgcatcgtcgccaac
gtgccaggcccgcccgacgacgtgcccggcggccaggcgatcagcgccctgctctacgtc
gtcaaggaaggcgggctgttccactacgcctacgaaggcgtggccaagctgatcatcccg
ccgctgatcttcctgggcgtgggcgcgatgaccgacttcgggccgatgatcgccaacccg
cgcctcgtgatcctgggcgccggcgcgcacctgggcatcttcgtcgcgctgatcctggcc
aagctctgcggcttcacgctcgccgaagccggtgcgatcggcatcatcggcggcgccgac
gggccgatggcgatcttcgtgacgatgaagctggcgccgcacctgctggggccgatctcg
gtggcggcgtattcgtacatggcgctgatgccgctgatccagccgccggtgatgcggctc
ttgacgaccaaggccgagcgccagatcacgatgaagcagctgcgcacggtgggcaaggcc
gagaagatcgccttcccgatcgtcatcgcggtcatcgtcaacctcttcttcccgccggtc
gcgccgctgatcacgatgctgatgctaggcaacctgctcaaggaatgcggcgtcaccgag
cgcctggccaagaccgccgccggcgggctgatgaacgtcatcgtgctggtgctgacggtg
gccatcggctcgacgatggcggccgacaagttcctgaactggaacacgctgctgatcgtg
ctgctgggcctggtggccttcgtcttcggcaccgcctcgggcgtcatcaccgccaaggtg
atgaacctgttcctgaaggacaagatcaacccgctgatcggctcggccggcatcgcctcg
gtgccgatcgcggcgcgtgtctcccacatcgtcgcgaaccaggagaacccgaagaacttc
ctgatctaccacgcgatggggcccaacctggccggcgtcttcggcaccgccatctccggc
ggcatcctgctggcgctgctgggcgcgggctga
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