Rubrivivax gelatinosus: RGE_12280
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Entry
RGE_12280 CDS
T01803
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00020
Citrate cycle (TCA cycle)
rge00190
Oxidative phosphorylation
rge00650
Butanoate metabolism
rge00720
Other carbon fixation pathways
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
Module
rge_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rge_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rge_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGE_12280 (sdhA)
00650 Butanoate metabolism
RGE_12280 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RGE_12280 (sdhA)
00720 Other carbon fixation pathways
RGE_12280 (sdhA)
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RGE_12280 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
GIDA
FAD_oxidored
Pyr_redox_3
NAD_binding_7
ThiF
Caps_syn_GfcC_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BAL94569
UniProt:
I0HNI2
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All DBs
Position
1276546..1278339
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AA seq
597 aa
AA seq
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MALAHLPKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGASL
GNMSEDNWHFHFYDTVKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIYQR
PFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVKARTNFFVEWMALDLIRDSEGDV
LGVTALEMETGEVHVLQAKCTLFATGGAGRIYAASTNAFINTGDGLGMAARAGVPLQDME
FWQFHPTGVHNAGVLLTEGCRGEGAILRNANGERFMERYAPTLKDLAPRDFVSRCMDQEI
KEGRGCGPNKDYINLDMTHLGGETILKRLPSVYEIGHNFANVDITKEPIPVVPTIHYQMG
GIPTNIHGQVVVPKDGTPNAVVNGFYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGNH
IVASALASRNHKDLPADAADRSLERLARLEASTSGEYAQDVANDIRKSMQQHAGVFRTQA
VMDEGVVQIAAIAERVKHIGLKDKSKVFNTARIEALEVDNLIEAAQATIVSAAARHESRG
AHTVNDYGDTPQHPNGRNDEEWLKHTLWFSEGNRLDYKPVNLKPLSVDSVPPKVRSF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgcccatcttcccaagcgcaagttcgacgtcgtcatcgtcggtgccggcggt
tccggcatgcgcgcctcgctgcaactggcccgcgcgggcctcaacgtcgccgtcctgtcc
aaggtcttcccgacgcgttcgcacaccgtcgcggcccagggcggcatcggcgccagcctc
ggcaacatgtccgaggacaactggcacttccacttctacgacaccgtcaagggctccgac
tggctcggcgaccaggacgcgatcgagttcatgtgccgcgaggcgccgaaggtcgtctac
gagctcgagcacttcggcatgccgttcgaccgcaacccggacggcacgatctaccagcgt
ccgttcggcggccacaccgcgaactacggcgagaagccggtgcagcgcgcctgcgccgcg
gccgaccgcaccggccacgcgatgctgcacacgctgtaccagcagaacgtcaaggcgcgc
accaacttcttcgtcgagtggatggcgctggacctgatccgcgacagcgaaggcgacgtg
ctcggcgtcaccgcgctggagatggagaccggcgaggtgcacgtgctgcaggccaagtgc
acgctgttcgcgaccggcggtgccggccgcatctacgcggcgagcaccaacgccttcatc
aacaccggcgacggcctgggcatggccgcgcgcgcgggtgtgccgctgcaggacatggag
ttctggcagttccacccgaccggcgtgcacaacgccggcgtgctgctgaccgaaggctgc
cgcggtgaaggcgcgatcctgcgcaacgccaacggcgagcgtttcatggagcgctacgcg
ccgacgctgaaggacctcgcgccgcgcgacttcgtctcgcgctgcatggaccaggagatc
aaggaaggccggggctgcggtccaaacaaggactacatcaacctcgacatgacccacctg
ggcggcgagaccatcctcaagcgcctgccctcggtctacgagatcggccacaacttcgcc
aacgtcgacatcacgaaggaaccgatccccgtggtgccgaccatccactaccagatgggt
ggcatcccgaccaacatccacggccaggtcgtggtgcccaaggacggcacgcccaacgcg
gtggtcaacggcttctacgcggtgggcgagtgctcctgcgtcagcgtgcacggcgccaac
cgcctgggcacgaactcgctgctggacctgctggtcttcggccgcgccgccggcaaccac
atcgtcgccagcgcgctggcgagccgcaaccacaaggatctgccggccgacgccgccgac
cgctcgctcgagcgcctggcgcgcctggaggcctcgacctcgggcgagtacgcccaggac
gtcgccaacgacatccgcaagtcgatgcagcagcacgccggcgtgttccgcacgcaggcc
gtgatggacgaaggcgtggtgcagatcgccgcgatcgccgaacgcgtcaagcacatcggc
ctgaaggacaagagcaaggtgttcaacaccgcgcgcatcgaggcgctggaggtggacaac
ctgatcgaggccgcgcaggcgacgatcgtctcggccgccgcccgccacgagagccgcggc
gcgcacaccgtcaacgactacggcgacaccccgcaacacccgaacggccgcaacgacgag
gagtggctcaagcacacgctgtggttcagcgaaggcaaccggctcgactacaagccggtg
aacctcaagccgctgagcgtcgacagcgttccgcccaaggtccgttcgttctaa
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