Rubrivivax gelatinosus: RGE_12410
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Entry
RGE_12410 CDS
T01803
Name
(GenBank) biotin carboxylase
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00280
Valine, leucine and isoleucine degradation
rge00630
Glyoxylate and dicarboxylate metabolism
rge00640
Propanoate metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGE_12410
00640 Propanoate metabolism
RGE_12410
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RGE_12410
Enzymes [BR:
rge01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
RGE_12410
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
GARS_A
ATP-grasp_3
Biotin_lipoyl_2
ATP-grasp_5
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-ProteinID:
BAL94582
UniProt:
I0HNJ5
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Position
1292182..1294212
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AA seq
676 aa
AA seq
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MFKKILIANRGEIACRVIKTAKKLGIATVAVYSDADRDARHVELADEAVHIGPAPSRESY
LVADKIIAAAKQTGAEGIHPGYGFLSENEDFARRVEEEGIVFIGPKHYSIAAMGDKIASK
KLANEAGVSTIPGWNEAIESPEQAVQIARDIGYPVMIKASAGGGGKGLRVAFNDKEAHEG
FASCRNEAKNSFGDDRVFIEKFVEEPRHIEIQVLGDAHGNVVYLHERECSIQRRHQKVIE
EAPSPFISDATRRAMGEQAVALAKAVKYQSAGTVEFVVGKDQSFYFLEMNTRLQVEHPVT
ECITGIDLVEQMLRVASGEPLPFKQADIPRRGWAMECRINAEDPFRNFLPSTGRLVRYMP
PAQTMEAAMPVPAGGGVRVDTGVYEGGEIPMQYDSMIAKLIVHGLDRDDAIARMREALNG
FVIRGVSSNIPFQSALLAHPDFVAGQFNTGFIAEHYGKGFRAEDVPHDDPDFLVALVATV
YRRYLGRAASISGQLAGHNLRIGTDFVVVVRGEAGEHTHVPVKIEVAGNTTTVSVNGRSY
GIVKEWRFGSIRATGTCNGRPFTAQAERNGVWYSVAHNGRRIDAMVMRARAAELLRVMPF
KPPADMSKFLLSPMPGLLVQVAVKPGQAVVAGERLAVIEAMKMENILTAAQDGTVAEVLA
DQGESLAVDQPIIRFA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaagatcctgatcgccaaccgcggcgagatcgcctgccgcgtcatcaagacg
gcgaagaagctgggcatcgcgacggtggccgtctattcagacgccgaccgcgacgcgcgc
cacgtcgagctggccgacgaggccgtgcacatcggcccggcgcccagccgcgagagctac
ctcgtcgccgacaagatcatcgccgcggccaagcagaccggcgccgaaggtatccacccc
ggctacggcttcctgtccgagaacgaggacttcgcccgccgcgtcgaggaggaaggcatc
gtcttcatcggcccgaagcactacagcatcgcggcgatgggcgacaagatcgcctccaag
aagctggccaacgaggccggcgtcagcacgatcccgggctggaacgaagccatcgagtcg
cccgagcaggccgtgcagatcgcacgcgacatcggctacccggtgatgatcaaggccagc
gccggcggcggcggcaagggcctgcgcgtggccttcaacgacaaggaggcgcacgaaggc
ttcgcctcctgccgcaacgaggccaagaacagcttcggcgacgaccgcgtcttcatcgag
aagttcgtcgaggagccgcgccacatcgagatccaggtgctcggcgacgcccacggcaac
gtcgtctacctgcacgagcgcgagtgctcgatccagcgccgccaccagaaggtcatcgag
gaagcgccgtcgccgttcatcagcgacgccacgcgccgtgcgatgggcgaacaggccgtg
gcgctggccaaggcggtgaagtaccagtcggccggcaccgtcgagttcgtcgtcggcaag
gaccagagcttctatttcctggagatgaacacgcggctgcaggtggagcacccggtcacc
gagtgcatcaccggcatcgacctcgtcgagcagatgctgcgcgtggcctcgggcgagccg
ctgccgttcaagcaggccgacatcccgcgccgcggctgggcgatggagtgccgcatcaac
gccgaggacccgttccgcaacttcctgccgtccaccggccgcctggtgcgctacatgccg
cccgcgcagacgatggaagcggcgatgccggtgcctgccggcggcggcgtgcgcgtggac
accggcgtctacgaaggcggcgagatcccgatgcagtacgactcgatgatcgccaagctc
atcgtgcacgggctggaccgcgacgacgccatcgcccgcatgcgcgaggcgctcaacggc
ttcgtcatccgcggcgtgtcgagcaacatcccgttccagtcggcgctgctggcgcacccg
gacttcgtcgccggccagttcaacaccggcttcatcgccgagcactacggcaagggcttc
cgcgccgaggacgtgccgcacgacgaccccgacttcctcgtcgcgctggtggccaccgtc
taccgccgctacctcggccgcgcggccagcatcagcggccagctcgcgggccacaacctg
cgcatcggcaccgacttcgtcgtcgtcgtgcgcggcgaggccggcgagcacacgcacgtg
ccggtgaagatcgaggtcgcgggcaacacgacgacggtcagcgtcaacggccgcagctac
ggcatcgtcaaggaatggcgcttcggctcgatccgcgccaccggcacctgcaacggccgc
ccgttcaccgcgcaggccgaacgcaacggcgtctggtacagcgtggcgcacaacggccgc
cgcatcgacgcgatggtgatgcgcgcccgcgctgccgaactgctgcgcgtgatgccgttc
aagccgcccgcggacatgagcaagttcctgctctcgccgatgccgggcctgctggtgcag
gtcgcggtcaagccggggcaggccgtcgtggccggcgaacgcctggccgtcatcgaagcg
atgaaaatggagaacatcctcacggcggcgcaggacggcaccgtcgccgaggtgctggcc
gatcagggcgagagcctggcggtcgaccagcccatcatccgcttcgcctga
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