Rubrivivax gelatinosus: RGE_13870
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Entry
RGE_13870 CDS
T01803
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1 RpsA
KO
K02945
small subunit ribosomal protein S1
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RGE_13870 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rge03011
]
RGE_13870 (rpsA)
Ribosome [BR:
rge03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RGE_13870 (rpsA)
Bacteria
RGE_13870 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BAL94728
UniProt:
I0HNZ1
LinkDB
All DBs
Position
complement(1420157..1421872)
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AA seq
571 aa
AA seq
DB search
MSVSTTVIAKSGADAFAALFEESLKSSDMRVGEVISAEVVRIEFNHVVVNAGLKSESYVP
IDEFKNDQGELEVQVGDFVAVAIDAVENGYGDTILSRDKAKRLASWMALENALESGDFVT
GTVSGKVKGGLTVLVNGIRAFLPGSLLDTRPVKDMSPFEGKTMEFKVIKLDRKRNNVVLS
RRAVVEASMGEERAKLLETLTEGAIVHGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVR
HPSEVVQVGQELSAKVLKFDAEKNRVSLGIKQLGDDPWLGVSRRYPNGTRLFGKITNIAD
YGAFVEIEPGIEGLVHVSEMDWTNKNVAPSKVVSLGEEVEVMVLEIDEDKRRISLGMKQC
KPNPWEEFAANVKRGDKVKGPVKSITDFGVFVGLSAGIDGLVHLSDLSWNEPGESAVRNY
KKGQEVEAIVLAIDVERERISLGIKQLDVDPFTSFTTLNDRGAIVTGKVKTVDPRGAEIQ
LNDDVTGYLRASEISRDRVEDARNVLKEGDDVSVMIINVDRKLRSIQLSIKAKDNADEQQ
SMQALRQTNERENAGTTSLGALLRAKLDNRE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtttccactaccgtcatcgccaagagcggcgctgatgccttcgccgccctgttc
gaggaatcgctgaagagctccgacatgcgtgtcggcgaagtgatctccgccgaggtcgtg
cgcatcgagttcaaccacgtcgtcgtcaacgccgggctcaagagcgagtcctacgtgccc
atcgacgagttcaagaacgaccagggcgaactcgaagtccaggtcggcgacttcgtcgcg
gtggccatcgacgccgtcgagaacggctacggcgacaccatcctcagccgcgacaaggcc
aagcgcctggcgtcgtggatggcgctggagaacgcgctggagtcgggcgacttcgtcacc
ggcacggtcagcggcaaggtcaagggcggcctgacggtgctggtcaacggcatccgcgcc
ttcctgccgggttcgctgctcgacacgcgtccggtcaaggacatgagcccgttcgagggc
aagaccatggagttcaaggtcatcaagctcgaccgcaagcgcaacaacgtcgtgttgtcg
cgccgcgccgtcgtcgaggcttcgatgggcgaagaacgcgccaagctgctcgagacgctg
accgaaggcgccatcgtgcacggcgtggtcaagaacatcaccgaatacggtgcgttcgtc
gacctcggcggcatcgacggcctgctgcacatcaccgacatggcctggcgccgcgtgcgt
cacccgagcgaggtggtgcaggtcggtcaggaactgtcggccaaggtcctcaagttcgac
gccgagaagaaccgcgtcagcctgggcatcaagcagctgggcgacgatccgtggctgggc
gtctcgcgccgctacccgaacggcacgcgcctgttcggcaagatcaccaacatcgccgac
tacggcgcgttcgtcgagatcgagccgggcatcgaaggcctggtgcacgtctccgaaatg
gactggacgaacaagaacgtcgccccgtccaaggtggtctcgctgggcgaggaagtcgaa
gtcatggtcctcgagatcgacgaagacaagcgtcgcatctcgctgggcatgaagcagtgc
aagccgaacccctgggaagagttcgccgccaacgtcaagcgcggcgacaaggtcaagggc
ccggtcaagtcgatcaccgacttcggcgtcttcgtcggcctgtctgcgggcatcgacggc
ctggtgcacctgtccgacctgtcgtggaacgagccgggcgaaagcgcggtccgcaactac
aagaagggccaggaagtcgaagccatcgtgctggcgatcgacgtcgagcgcgagcgcatc
agcctgggcatcaagcagctggacgtcgatccgttcaccagcttcacgacgctcaatgac
cgcggcgccatcgtcaccggcaaggtgaagacggtcgacccgcgcggcgccgagatccag
ctcaacgacgacgtcaccggctacctgcgtgcgtccgaaatcagccgcgaccgcgtcgaa
gacgcgcgcaacgtgctgaaggaaggcgacgacgtctcggtcatgatcatcaacgtcgac
cgcaagctgcgttcgatccagctgtcgatcaaggccaaggacaacgccgacgagcaacag
tcgatgcaggccctgcgccagaccaacgagcgcgagaacgccggtacgacgagcctgggc
gccctgctgcgcgccaagctcgacaaccgcgagtaa
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