Rubrivivax gelatinosus: RGE_13920
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Entry
RGE_13920 CDS
T01803
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rge03032
]
RGE_13920 (gyrA)
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_13920 (gyrA)
Enzymes [BR:
rge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGE_13920 (gyrA)
DNA replication proteins [BR:
rge03032
]
Prokaryotic type
DNA Topoisomerases
RGE_13920 (gyrA)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGE_13920 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAL94733
UniProt:
I0HNZ6
LinkDB
All DBs
Position
complement(1426660..1429320)
Genome browser
AA seq
886 aa
AA seq
DB search
MSQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELSNHWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM
RYTEIRLAKIAHEMLEDIDKETVDFAPNYDGSEKEPTVLPARLPNLLVNGSAGIAVGMAT
NIPPHNLNEIVDACLHLLKVPESTIEELMEIVPAPDFPTAGIIYGLEGVREGYRTGRGRV
VMRAKCHFEDIDRGQRQSIIVDEIPYQVNKKTLLERIAELVNEKKIEGISHIQDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDSFGINMVALVDGQPRLCNLKQLLEIFLEHRRE
VVTRRTVYELKKARERGHVLEGLAVALANIDEFIETIKTSPTPPMAKAALMSKAWDSSMV
REMLARAEESTAGGRAAYRPEGLPAGYGLQADGLYRLSEDQAQEILQMRLQRLTGLEQDK
IIGEYREVMTQIADLLDILSRPERVTAILVDELNALRQEFGQTKVGARRSVIERNAQELG
TEDLITPTDMVVTLSHTGYIKSQPLTEYRAQRRGGRGKQATQTKEDDWIDQLFIANTHDW
ILCFSDRGRVYWLKVWEVPQGSRNSRGKPIVNMFPLQPGEKITVVLPLTGEFRSFPADHY
VFMVTAFGTVKKTPLDDFSNPRKAGIIAVGLDDGDYLIGAALTDGHHDVMLFSDGGKAVR
FNEDPEEGGVRPMGRQAGGVKGMELEPGQRVIALLVAEDETQSVLTATENGYGKRTPIAE
YTRHRRGGKGMISMLQSERNGKVVAATLARDTDEIMLITDRGVLVRTRVAEIREMGRATQ
GVTLISLDDGTRLSGLQRIVENDAQTEGAGDDTSNDSAGDAGTENA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcgccaaggaaaccctgccgatcagcctcgaagaggagatgcggcgttcg
tatctcgattacgcgatgagcgtgatcgtcggacgcgccctccccgacgcccgagacggc
ctcaagcccgtgcaccgccgtgtcctgtacgcgatgcacgagctgtccaaccactggaac
cgcccttacaagaagagcgcccgcatcgtcggcgacgtgatcggtaaatatcacccgcac
ggcgacacggcggtctacgacacgatcgtgcgcatggcgcaggacttcagcctgcgccac
atgctcgtcgacggccagggcaacttcggctcggtcgacggcgacagcgccgcggcgatg
cgctacaccgagatccgtctggcgaagatcgcccacgagatgctcgaggacatcgacaag
gaaacggtcgatttcgccccgaactacgacggctccgagaaggagccgacggtgctgccg
gcgcggctgcccaacctgctggtcaacggctcggccggcatcgcggtcggcatggcgacc
aacatcccgccgcacaacctcaacgagatcgtcgacgcctgcctgcacctgctaaaggtg
cccgagtcgacgatcgaggagctgatggagatcgtgccggcgccggacttcccgaccgcc
gggatcatctacggcctcgaaggcgtgcgcgagggctaccgcaccgggcgcgggcgcgtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccagtcgatcatc
gtcgacgagatcccgtaccaggtgaacaagaagacgctgctcgagcgcattgccgagctc
gtcaacgagaagaagatcgagggcatcagccacatccaggacgagagcgacaagtccggg
atgcgcgtggtcatcgagttgaagcgcggcgaagtgcccgaggtcgtgctcaacaacctc
tacaagcagacccagctccaggacagcttcggcatcaacatggtcgcgctggtcgacggc
cagccgcgcttatgcaacctgaagcagctgctggagatcttcctcgagcaccggcgcgag
gtcgtcacccgccgcaccgtctacgagctgaagaaggcgcgcgagcgcggccacgtgctc
gaaggcctggcggtggcgctggccaacatcgacgagttcatcgagacgatcaagaccagc
ccgacgccgccgatggccaaggcggcgctgatgtccaaggcctgggacagctcgatggtg
cgcgagatgctcgcgcgcgccgaggaatcgacggccggcggccgcgctgcctatcgcccc
gagggcctgcccgcgggctacggcctgcaggccgatggcctgtaccggctgtccgaggac
caggcgcaggaaatcctgcagatgcgcctgcagcgcctgaccggcctggagcaggacaag
atcatcggcgagtaccgcgaggtcatgacgcagatcgccgacctgctggacatcctgtcc
cgtccggagcgcgtgaccgcgatcctcgtcgacgagctcaacgcgctgcgacaggagttc
ggccagaccaaggtcggcgcgcgccgcagcgtcatcgagcgcaacgcgcaggaactcggc
accgaagacctgatcacgccgaccgacatggtggtgacgctcagtcacaccggttacatc
aagagccagccgctgaccgagtaccgcgcccagcgccgcggcggccgcggcaagcaggcg
acgcagaccaaggaagacgactggatcgaccagctcttcatcgccaacacgcacgactgg
atcctgtgcttctcggatcgcggccgcgtctactggctgaaggtctgggaggtgccgcaa
ggctcgcgcaactcgcgcggcaagccgatcgtcaacatgttcccgctgcagccgggtgag
aagatcaccgtcgtgctgccgctgaccggcgagttccgcagcttcccggccgaccactac
gtcttcatggtgacggccttcggcaccgtcaagaagacgccgctggacgacttcagcaac
ccgcgcaaggccggcatcatcgccgtcggcctggacgacggcgactacctgatcggcgcc
gcgctgaccgacggccatcacgacgtgatgctgttctccgacggcggcaaggcggtgcgc
ttcaacgaagacccggaagaaggcggtgtgcgcccgatgggccgccaggccggcggcgtc
aagggcatggagctcgaacccggccagcgcgtcatagcgctgctggtcgccgaggacgag
acgcaaagcgtgctcaccgcgaccgagaacggctacggcaagcgcaccccgatcgccgaa
tacacccgccaccgccgtggcggcaagggcatgatctcgatgctccagagcgagcgcaac
ggcaaggtcgtggcggccacgctggcgcgcgacaccgacgagatcatgctgatcaccgac
cgcggcgtgctcgttcgcacccgcgtcgccgaaatccgcgaaatgggccgcgcgacgcag
ggcgtcacgctgatctcgctggacgacggcacccggctctccggcctgcagcgcatcgtc
gagaacgacgcgcagaccgaaggcgccggcgacgacacgtccaacgacagcgccggcgat
gccggcacggagaacgcgtga
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