Rubrivivax gelatinosus: RGE_17580
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Entry
RGE_17580 CDS
T01803
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rge
Rubrivivax gelatinosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
PAS_7
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
BAL95099
UniProt:
I0HQ12
LinkDB
All DBs
Position
complement(1822387..1824600)
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AA seq
737 aa
AA seq
DB search
MGDPESRLRAASRAAAVVTNRKTVSVPSPHHARPGMDETGRHIGAETELQAVHAAVLRLL
RLHQNALDAISQGVLITDANRRTTYVNAAFVELTGYTAEEMLGNSCALLQGAATSAETVQ
AMREALDRGEPFHGELLNYRKDGTPFWNELKIVPVRDDDGVITQFVGVQRDVTARRDAMN
KLSLAARVFEQSNEALAIADLNGRFVAVNNAFTRITGYAEHEAVGQNPRLLKSGLHDENF
YQRFWHELQTRGRWEGEIWNRRKDGSVYPEWLSVGRVVDDAGQTVNYVASFSDITERKHA
EENVRRLAYYDPLTGLPNRALLHERASQALQIAVRHGEPVALMFLDLDHFKNVNDTLGHP
VGDRLLVALAQRMRPVLRDQDTLARVGGDEFVLVLPATDAAGATHVAQKLLQIVQEPLQV
EGHELTVTPSIGVAVFPTDAADFDTLFAFADAAMYRAKMSGRATFSFYTAEMQAQMARTL
RVENALRRALDRGEMQLHYQPQCTVADGHVVGVEALLRWNHPELGWIGPAEFVPLAESSG
QIAVIGRWVLDTALRQLRAWLDAGLPPLRMAVNLSAVQLRQPGLADLVGELLRRHGIEPA
WLELELTETMAWDDPEGSARQVARLRAMGLRIALDDFGAGYTSFTHLSLFQAGTLKIDRS
LVANITSGVSENSVVAAIVNLARTLRMHTVAEGVETPAQREALLAAGCESAQGWLYGRAM
TAEAFLALMLDRRPPPA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgatccagaatccaggcttcgggcggcgtcacgggccgccgccgtcgtcacgaat
cgaaagactgtttcggtgccttccccccaccacgcccgaccgggcatggacgagaccggc
cgccacatcggcgccgagaccgagttgcaggcggtgcatgctgccgtgctgcggctgctg
cgcctgcaccagaacgcgctcgacgccatctcccagggtgtcctgatcaccgacgccaac
cggcgcacgacctacgtcaacgccgccttcgtcgagctgaccggctacaccgccgaggag
atgctcggcaactcctgcgccctgctgcagggcgccgcgacctcggccgagaccgtgcag
gcgatgcgcgaggcgctggaccgcggcgagcccttccacggcgagctgctgaactaccgc
aaggacggcacgccgttctggaacgagctgaagatcgtcccggtgcgcgacgacgacggc
gtcatcacgcagttcgtcggcgtgcagcgcgacgtcacggcacgccgcgacgcgatgaac
aagctgtcgctggccgcgcgcgtgttcgagcagagcaacgaggcgctggccatcgccgac
ctcaacggccgcttcgtcgccgtcaacaacgcgttcacgcgcatcaccggctacgccgag
cacgaggccgtggggcagaacccgcggctgctgaagtcggggctgcacgacgagaacttc
taccagcgcttctggcacgagctgcagacccgcgggcgctgggaaggcgagatctggaac
cgccgcaaggacggctcggtctaccccgaatggctgtcggtgggccgcgtcgtcgacgac
gccggccagacggtgaactacgtcgcctcgttcagcgacatcaccgaacgcaagcacgcc
gaggagaacgtgcgccgcctggcgtactacgacccgctgaccggcctgcccaaccgcgcg
ctgctgcacgagcgcgcctcgcaggcgctgcagatcgcggtgcgccacggcgagccggtg
gcgctgatgttcctggacctggaccacttcaagaacgtcaacgacacgctgggccacccg
gtgggcgaccggctgctggtcgcgctggcgcagcgcatgcgcccggtgctgcgcgaccag
gacacgctggcgcgtgtcggcggcgacgagttcgtgctcgtgctgcccgccaccgacgcc
gcgggcgcgacgcacgtcgcgcagaagctgctgcagatcgtgcaggagccgctgcaggtc
gaaggccacgagctgacggtgacgccgtcgatcggcgtggcggtcttcccgaccgatgcc
gccgacttcgacacgctgttcgccttcgccgacgcggcgatgtaccgcgccaagatgtcg
ggccgcgcgaccttcagcttctacaccgccgagatgcaggcgcagatggcgcgcacgctg
cgtgtcgagaacgcgctgcggcgggcgctggaccgcggcgagatgcagctgcactaccag
ccgcagtgcacggtggccgacggccacgtcgtcggcgtcgaggcgctgctgcgctggaac
caccccgagctgggctggatcggcccggcggagttcgtgccgctggccgagtccagcggc
cagatcgcggtcatcggccgctgggtgctggacaccgcgctgcgccagctgcgcgcctgg
ctcgatgccggcctgccgccgctgcgcatggcggtcaacctctcggcggtgcagctgcgc
cagcccgggctggccgacctggtgggcgagctgctgcgccgccacggcatcgaaccggcc
tggctggagctggagctcaccgagaccatggcctgggacgacccggaaggctcggcgcgc
caggtcgcgcggctgcgcgcgatggggctgcgcatcgcgctggacgacttcggcgccggc
tacacctcgttcacgcacctgagcctgttccaggccggcacgctgaagatcgaccgttcg
ctggtcgccaacatcaccagcggggtgagcgagaacagcgtcgtcgcggccatcgtcaat
ctggcgcgcacgctgcgcatgcacaccgtggccgaaggcgtggagacgccggcgcagcgc
gaggcgctgctggccgccggctgcgagtcggcccagggctggctgtacggccgcgcgatg
accgccgaggcgttcctggcgctgatgctcgatcgccgcccaccgccggcctga
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