Rubrivivax gelatinosus: RGE_18800
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Entry
RGE_18800 CDS
T01803
Symbol
cobB
Name
(GenBank) cobyrinic acid A,C-diamide synthase CobB
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00860
Porphyrin metabolism
rge01100
Metabolic pathways
rge01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE_18800 (cobB)
Enzymes [BR:
rge01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
RGE_18800 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
RGE_18800 (cobB)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BAL95221
UniProt:
I0HQD4
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Position
1962814..1964139
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AA seq
441 aa
AA seq
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MIPPGLLVAAPASGCGKTTVTLGLLAAWRAAGLAVQPFKNGPDYIDPAFHSAAAGRASFN
LDSWAMGRERVAGLLGAAEGCDLLLAEASVGLFDGAVTPGEWGRGAGADLAEAFGWPVLL
VLDVRGQAQSAAAVTLGFASLRPGLKLAGVLLNRVGSARHEATVRSAVEAAGFRVFGALP
RDAAVALPERHLGLVQAEELPERAATLAALGRLVAEHVDLDALRAAAAGACEPKPALPLP
PPGARIALARDAAFSFVYPHLLDAWHAAGAALLPFSPLADEAPDDSADACWLPGGYPELH
AGRLAAATRWRDGLRAFARTRPVHGECGGYMALGAMLEDADGSRHAMAGLLGLETSFRKR
RLHLGYRLAELQVPLPGYAAGTRLRGHEFHYASVLAQPDAPLARIVDADGREVAETGSWR
ALDGGGRVSGSFFHLVAPAAG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcccgggctgctggtcgcggcgcccgcctcgggctgcggcaagacgacggtg
acgctgggcctgctggccgcctggcgcgctgccgggctggccgtgcagccgttcaagaac
ggccccgactacatcgacccggccttccactcggcggctgccggccgcgcttcgttcaac
ctggacagctgggcgatgggccgcgagcgggtcgccggcctgctgggcgcggccgagggc
tgcgacctgctgctggccgaagcctcggtgggcctgttcgacggcgccgtgacacccggc
gaatggggccgcggcgccggcgccgacctggccgaagccttcggctggccggtgctgctg
gtgctggacgtgcgtggccaggcgcagtcggccgccgcggtgacgctgggcttcgccagt
ctgcgcccgggcctgaagctcgccggcgtgctgctgaaccgcgtcggcagcgcgcgccac
gaggcgaccgtgcgcagcgcggtcgaggccgcgggcttccgcgtcttcggtgcgctgccg
cgcgacgccgccgtggccttgcccgaacgccacctgggcctggtgcaggccgaggaactg
cccgaacgcgccgcgacgctggccgcgctgggccggctggtcgccgaacacgttgacctg
gacgcgctgcgtgctgccgccgcgggtgcctgcgagcccaagccggcgttgccgctgcca
ccgccgggcgcgcgcatcgcgctggcgcgcgacgccgccttctccttcgtctacccgcat
ttgctggacgcctggcacgccgccggcgcggcgctgctgccgttctcgccgctggccgac
gaagcgcccgacgacagcgccgacgcctgctggctgcccggcggctaccccgagctgcac
gccggccgcctggccgccgccacacgctggcgcgacggcctgcgcgccttcgcgcgcacg
cggccggtgcacggcgaatgcggcggctacatggcgctgggcgcaatgctggaagacgcc
gacggcagccgccacgcgatggccgggctgctgggtctggaaacctcgttccgcaaacgc
cgcctgcacctgggctaccgcctcgccgagctgcaggtgccgctgcccggttatgccgcc
ggcacgcggctgcgtggccacgagttccactacgccagcgtgctcgcccagcccgacgcg
ccgctggcgcgcatcgtcgacgccgacggccgcgaggtcgccgagaccggctcgtggcgg
gcgctggacggcggcgggcgggtgagcggcagcttttttcatctcgtggcgccggctgcg
ggctga
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