KEGG   Rubrivivax gelatinosus: RGE_19720
Entry
RGE_19720         CDS       T01803                                 
Symbol
lafS
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
rge  Rubrivivax gelatinosus
Pathway
rge02020  Two-component system
rge02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RGE_19720 (lafS)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RGE_19720 (lafS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rge03021]
    RGE_19720 (lafS)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:rge02035]
    RGE_19720 (lafS)
Transcription machinery [BR:rge03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RGE_19720 (lafS)
Bacterial motility proteins [BR:rge02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    RGE_19720 (lafS)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 PI3K_1B_p101
Other DBs
NCBI-ProteinID: BAL95313
UniProt: I0HQM6
LinkDB
Position
2057072..2057797
AA seq 241 aa
MSALPQLRYDAYGEPPAAAAGALDEQRLLLAHAAIVKRVVRQLHAQVGGVMGREDMEQVG
LMGLLEALRRYGPPDERFPAFAAARVRGAVLDELRRQDWRPRSVRQESHRVRDGVRELRR
RLGREPSDGEVAAALGMTLQALQEAQRAENAEELASFDELVAEMAEIPSDQRSPEDAYVA
RRSLEQALRSLDEREQRVVQLYYEFDLGLREIAAVLGLTEARVCQINKGALRKMKVFLQA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagcgcgctgccccaactccgctacgacgcgtacggcgagccgcccgcggcggccgcc
ggcgcgctcgacgagcagcgcctgctgctggcgcatgcggccatcgtcaagcgcgtggtg
cgccagttgcacgcccaggtcggcggcgtgatgggccgcgaggacatggagcaggtcggc
ctgatgggcctcttggaggcgctgcgccgctacggcccgcccgacgaacgtttcccggct
ttcgccgcggcgcgcgtgcgcggcgccgtgctcgacgagctgcgccgccaggactggcgc
ccgcgcagcgtgcgccaggaaagccaccgcgtgcgcgacggcgtgcgcgagctgcgccgc
cgcctgggccgcgagcccagcgacggcgaagtcgccgcggcgctgggcatgacgctgcag
gcgctgcaggaggcgcagcgcgccgagaacgccgaggagctggcgagcttcgacgagctc
gtcgccgagatggccgagatcccgtcggaccagcgctcgcccgaggacgcctacgtcgcg
cggcgcagcctggagcaggcgctgcgcagcctggacgagcgcgagcagcgtgtcgtgcag
ctctattacgagttcgacctcggcctgcgcgagatcgccgcggtgctcggcctgaccgag
gcgcgcgtctgccagatcaacaagggggcgctgcggaagatgaaagtcttcctgcaggcc
gcctga

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