Rubrivivax gelatinosus: RGE_19940
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Entry
RGE_19940 CDS
T01803
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00450
Selenocompound metabolism
rge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RGE_19940
Enzymes [BR:
rge01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RGE_19940
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RGE_19940
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
BAL95335
UniProt:
I0HQP8
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All DBs
Position
complement(2074469..2076370)
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AA seq
633 aa
AA seq
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MTTPEIPAAAPPPGLPDPALLARLAGELFSSWPGAATVPATGGVPLPERPHPAGLTPPPG
SYGPSTPAAVPGGLPPGANLVPTSPQSAANIGASAPARLPHAQAGNGVPDVPLSAAPAYD
GRVGSHLLAVPQAPAAPFHFAEAEALGFPAAEAAPAATPTADPAFEALRALPWQLPTAAA
VPRLDAVPTPPAAPASASPRYYFVPEAAPAAPAGRPGFADAHPPLDVHAVRRDFPLLNER
INGHRVVWLDNAATTQKPQAVIDRLAHFYAHENSNIHRAAHALAARATDAYEQARETVRR
FIGAASTEEIVFVRGATEAINLVAAAWGCRHVGPGDEIVVSHLEHHANIVPWKRLADERG
AKLRVIPVDDSGQVRLDEYQRLLNERTKIVAVTQVSNALGTVVPVDQIVAIARRAGIRTL
VDGAQSVSHLKVDVRALDTDFFVFSGHKVFGPTGIGVLYGRREVLEDLAPWQGGGNMIAD
VSFERIVYQPPPARFEAGTGNIADAVGLGAALEYVERLGIENIAKYEHGLLEYATGRMAE
VPGLRPIGTARDKASVLSFVLAGYSTDEVGQALNREGIAVRTGHHCAQPILRRFGLEATV
RPSLAFYNTCEEIDQLVAVLQRLAAARPVAGRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccccgagatcccggccgcggcgccgccgcccggcctgcccgacccggcgctg
ctggcgcgtctggccggcgaacttttcagcagctggccgggcgcggccacggtgccggcc
accggcggcgtgccgctgcccgagcggccgcatccggccgggctgacgccgccgccgggc
agctacggcccgtccacgccggccgccgtgccgggcggtctgccgcccggcgccaacctc
gtgccgacctcgccgcagagcgccgccaacatcggcgcctcggcgccggcacggctgccg
catgcgcaggccggcaacggcgtgcccgacgtgccgctgtcggccgcgccggcctacgac
ggccgcgtcggcagccacctgctggcggtgccgcaggcgccggcggcgcccttccatttc
gccgaggccgaggcgctgggtttcccggccgccgaagcggcaccggcggcgacgccgacg
gccgacccggccttcgaggcgctgcgcgccctgccctggcagctgccgaccgcggccgcc
gtgccgcggctggacgcggtgccgacgccaccggccgcgccggccagcgcttcgccgcgc
tactacttcgtgcccgaagcggctccggcggcccccgccggccgcccgggcttcgccgac
gcccatccgccgctggacgtgcacgccgtgcggcgcgacttcccgctgctcaacgagcgc
atcaacggccaccgcgtcgtctggctggacaacgccgcgacgacgcagaagccgcaggcc
gtcatcgaccgcctggcgcacttctacgcccacgagaactcgaacatccaccgcgccgcg
catgcgctggcggcacgcgccaccgacgcctacgagcaggcgcgcgagaccgtgcgccgc
ttcatcggcgccgcgtcgaccgaggagatcgtcttcgtgcgcggcgccaccgaggccatc
aacctcgtcgccgccgcctggggctgccgccacgtcgggccgggcgacgagatcgtcgtc
tcgcacctcgagcaccacgccaacatcgtgccctggaagcgcctggccgacgaacgcggc
gccaagctgcgcgtgatcccggtcgacgacagcggccaggtgcggctcgacgagtaccag
cggctgctcaacgagcgcacgaagatcgtcgcggtgacgcaggtctccaacgcgctggga
accgtggtgccggtcgaccagatcgtcgccatcgcgcgccgcgccggcatccgcacgctg
gtcgacggcgcgcagtcggtgtcgcacctgaaggtcgacgtgcgcgcgctggacaccgac
ttcttcgtcttctcgggccacaaggtcttcgggccgaccggcatcggcgtgctctacggc
cgccgcgaggtgctggaggacctggcgccctggcagggcggcggcaacatgattgccgac
gtcagcttcgagcgcatcgtctaccagccgccgccggcccgtttcgaggccggcaccggc
aacatcgccgacgcggtggggctgggcgcggcgctggagtacgtcgagcgcctcggcatc
gagaacatcgcgaagtacgagcacgggctgctcgagtacgccaccggccgcatggccgag
gtgcccggcctgcggccgatcggcaccgcgcgcgacaaggccagcgtgctgtccttcgtg
ctcgccggctacagcaccgacgaggtcggccaggcgctcaaccgcgaaggcatcgcggtg
cgcaccggccaccactgcgcgcagcccatcctgcgccgcttcggtctggaagccacggtg
cggccctcgctggccttctacaacacctgcgaggagatcgaccagttggtggcggtgctg
cagcgcctggccgcggcgcggccggtggccggccgccgctga
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