Rubrivivax gelatinosus: RGE_21280
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Entry
RGE_21280 CDS
T01803
Symbol
frdA
Name
(GenBank) fumarate reductase flavoprotein subunit FrdA
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00020
Citrate cycle (TCA cycle)
rge00190
Oxidative phosphorylation
rge00620
Pyruvate metabolism
rge00650
Butanoate metabolism
rge00720
Other carbon fixation pathways
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
rge02020
Two-component system
Module
rge_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rge_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rge_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGE_21280 (frdA)
00620 Pyruvate metabolism
RGE_21280 (frdA)
00650 Butanoate metabolism
RGE_21280 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RGE_21280 (frdA)
00720 Other carbon fixation pathways
RGE_21280 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGE_21280 (frdA)
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RGE_21280 (frdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
DAO
Lycopene_cycl
FAD_oxidored
OPA3
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BAL95469
UniProt:
I0HR32
LinkDB
All DBs
Position
complement(2225741..2227510)
Genome browser
AA seq
589 aa
AA seq
DB search
METIDSDIVIVGGGGAGLRAAIAAQEADPKLKVALVSKVVPMRSHTVAAEGGSAGVIRDD
DSLDNHFDDTVSGGDWLCDQDVVRFFVERCTEEMVRLEHWGCPWSRKDDGSINVRFFGGM
KVQRTWFAADKTGFHMLHTLFQTSLKYPGIQRFDEFFVAELLVEDGRVQGVLAIEIATGK
FFLLRAKAVILATGGAGRVYSQNTNAGIVTGDGMGLAYRHGVALRDMEFVQYHPTALPGS
GILITEGCRGEGAILTNKDGHRYLQDYGLGPLDPWPRPKAMELGPRDRLSQAFWHEERKG
NTLTTRHGSAVNLDLRHLGAKKIHERLPLITEVAKTFAGIDPVHDPIPVRPAVHYTMGGI
ATNGRTETSLPGLYAAGECSSVGIHGANRLGSNSLSEIVVFGRVAGEAAAQYVRSAGATS
AASLERQAQAAVTRLEALHQHERGERVAVLREALGECMEKNVGIYREESGLAEACSTLAE
LRARWRAGVKLDDRSRAFNTEWLSAIELGSMLEVAEAMAHSARERKESRGAHQRLDGYTE
RDDERFLVHTLAERRGDEAPAISHRPVVITTSAPRARSYGGAGTKAILT
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatcgacagcgacatcgtgatcgtcggcggcggcggagccggcctgcgcgcg
gcgatcgccgcccaggaggcggatccgaaactcaaggtcgccctggtgtccaaggtggtg
ccgatgcgcagccacacggtggccgccgaaggcggctcggccggcgtcatccgtgacgac
gactcgctggacaaccatttcgacgacaccgtctccggcggcgactggctctgcgaccag
gacgtcgtgcgcttcttcgtcgagcgctgcaccgaggagatggtccgcctggagcactgg
ggatgcccctggagccgcaaggacgacggcagcatcaacgtgcgcttcttcggcggcatg
aaggtgcagcgcacgtggttcgccgccgacaagaccggcttccacatgttgcacacgctg
ttccagacctcgctgaagtacccgggaatccagcgtttcgacgagttcttcgtcgccgag
ctgctggtcgaggacggccgcgtgcaaggcgtgctggcgatcgagatcgccaccggcaag
ttcttcctgctgcgcgccaaggccgtgatcctggccaccggcggcgccgggcgcgtctac
agccagaacaccaacgccggcatcgtcaccggcgacggcatgggcctggcctaccgccac
ggcgtcgcgctgcgcgacatggagttcgtgcagtaccacccgaccgccctgcccggcagc
ggcatcctgatcaccgaaggctgccgcggcgaaggcgcgatcctgaccaacaaggacggc
caccgctacctgcaggactacggactcgggccgctggacccgtggccgcgcccgaaggcg
atggagctggggccgcgcgaccgcctgtcgcaggccttctggcacgaggaacgcaagggc
aacacgctgacgactcgccacggcagcgccgtcaacctcgacctgcgccacctcggcgcg
aagaagatccacgagcgcctgccgctgatcaccgaggtcgccaagaccttcgccggcatc
gacccggtgcacgacccgatcccggtgcgcccggcggtgcactacacgatgggcggcatc
gccaccaacggccgcaccgagacctcgctgcccggcctctacgccgccggcgagtgctcc
agcgtcggcatccacggcgccaaccggctgggctcgaactcgctgtcggagatcgtcgtc
ttcggccgcgtcgccggcgaagcggcggcgcagtacgtgcgctcggccggcgcgacgtct
gcggcgtcgctggagcgccaggcccaggccgcggtcacgcgcctggaggcgctgcaccag
cacgagcgcggcgaacgtgtcgccgtgctgcgcgaggcgctgggcgagtgcatggagaag
aacgtcggcatctaccgcgaggagtccggcctggccgaagcctgctcgacgctggccgag
ctgcgcgcgcgctggcgtgccggcgtcaagctcgacgaccgcagccgcgccttcaacacc
gagtggctgtcggcgatcgagctcggctcgatgctcgaagtggccgaggcgatggcgcac
tcggcgcgcgagcgcaaggagtcgcgcggcgcccaccagcgcctggacggctacaccgaa
cgcgacgacgaacgtttcctcgtgcacacgctggccgaacgccgcggcgacgaggctccg
gcgatctcgcaccgccccgtcgtcatcaccacctcggcgccgcgcgcacgcagctacggc
ggcgccggcaccaaggccatcctgacctga
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