Rubrivivax gelatinosus: RGE_23670
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Entry
RGE_23670 CDS
T01803
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00010
Glycolysis / Gluconeogenesis
rge00020
Citrate cycle (TCA cycle)
rge00260
Glycine, serine and threonine metabolism
rge00280
Valine, leucine and isoleucine degradation
rge00310
Lysine degradation
rge00380
Tryptophan metabolism
rge00620
Pyruvate metabolism
rge00630
Glyoxylate and dicarboxylate metabolism
rge00640
Propanoate metabolism
rge00670
One carbon pool by folate
rge00785
Lipoic acid metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
rge01210
2-Oxocarboxylic acid metabolism
rge01240
Biosynthesis of cofactors
Module
rge_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rge_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rge_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rge_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RGE_23670 (lpdA)
00020 Citrate cycle (TCA cycle)
RGE_23670 (lpdA)
00620 Pyruvate metabolism
RGE_23670 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RGE_23670 (lpdA)
00640 Propanoate metabolism
RGE_23670 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RGE_23670 (lpdA)
00280 Valine, leucine and isoleucine degradation
RGE_23670 (lpdA)
00310 Lysine degradation
RGE_23670 (lpdA)
00380 Tryptophan metabolism
RGE_23670 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RGE_23670 (lpdA)
00670 One carbon pool by folate
RGE_23670 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rge04147
]
RGE_23670 (lpdA)
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RGE_23670 (lpdA)
Exosome [BR:
rge04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RGE_23670 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
NAD_binding_8
GIDA
FAD_binding_2
AlaDh_PNT_C
Biotin_lipoyl_2
Pyr_redox_3
Thi4
FAD_binding_3
DAO
GCV_H
HI0933_like
DEC-1_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAL95708
UniProt:
I0HRS1
LinkDB
All DBs
Position
2490921..2492666
Genome browser
AA seq
581 aa
AA seq
DB search
MAVIEIRVPDIGDFKEVTVIEVLVAAGDTVKPEQSLITVESDKASMEIPSPHAGVLRSLA
VKVGDKVSQGVLLANIETAEAAAPAPAAPAAPAPQPAAQPAPAPVAAASGDAYDCDLLVL
GGGPGGYSAAFRAADLGMKVVLVERFPTLGGVCLNVGCIPSKALLHVAAVVDEAAHLAAA
GVSFGTPQIDLDQLRAHKQKVVSKLTGGLAAMAKMRKVTVVQGVGAFAGPHELAVELSAG
GTQTIRFAQAIIAAGSEAVKLPFLPDDERIVTSTGALQLRQRPKKMLVIGGGIIGLEMGT
VYSTLGARLDVVEMLDGLMAGADRDLVKVWQKMNAHRFDRLMLKTRTVGAEATADGIRVQ
FEAADGTRSDGVYDLVLQAVGRRPNGRAIGAERAGVQVDERGFVPVDVQMRTNVPHIFAI
GDLVGQPMLAHKAVHEGHVAAEVAAGDDKARFDARVIPGVAYTDPEVAWVGLTEDEAKAR
GVAVKKGLFPWSASGRAIANGRDEGFTKLLFDAQTHRILGGGIVGTHAGDMIGEVALAIE
MGADEVDIGRTIHPHPTLGESLGLAAEAAHGSCTDLPPARR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcatcgagatccgcgttcccgacatcggcgacttcaaggaagtcaccgtcatc
gaagtcctcgtcgccgccggcgacacggtcaagcccgaacagagcctgatcaccgtcgag
agcgacaaggcgtcgatggagatcccgtcgccgcacgccggcgtgctgcgcagcctcgcc
gtgaaggtcggcgacaaggtcagccagggcgtgctgctggcgaacatcgagaccgccgag
gcggcggcaccggccccggcggctcccgccgcgcccgccccgcagcctgcagcgcagccc
gcgccggccccggtggccgctgcgtccggcgacgcctacgactgcgacctgctggtgctg
ggcggcggcccgggcggctactcggctgccttccgcgctgccgacctcggcatgaaggtc
gtgctcgtcgagcgcttcccgacgctgggcggcgtctgcctcaacgtcggctgcatcccc
agcaaggcgctgctgcatgtcgccgcggtcgtcgacgaagcggcgcacctggcggccgcc
ggcgtcagcttcggcacgccgcagatcgacctggaccagctgcgcgcgcacaagcagaag
gtcgtctccaagctcaccggcgggctggccgcaatggccaagatgcgcaaggtgacggtg
gtgcagggcgtcggcgccttcgccgggccgcacgagctggccgtggagctctcggccggc
ggcacgcagacgatccgcttcgcccaggccatcatcgccgccggctccgaggcggtgaag
ctgcccttcctgcccgacgacgagcgcatcgtcacctccaccggcgcgctgcaactgcgc
cagcggccgaagaagatgctggtcatcggcggcggcatcatcggcctggagatgggcacg
gtctattcgacgctgggcgcgcgcctggacgtcgtcgagatgctcgacggcctgatggcc
ggcgccgaccgcgacctggtcaaggtctggcagaagatgaacgcccaccgcttcgaccgg
ctgatgctgaagaccaggacggtcggcgccgaagccaccgccgacggcatccgcgtgcag
ttcgaggcggccgacggcacgcgcagcgacggcgtctacgacctcgtgctccaggcggtc
ggccggcgcccgaacgggcgtgccatcggcgccgagcgtgccggcgtgcaggtcgacgaa
cgcggcttcgtgccggtggacgtgcagatgcgcaccaacgtgccgcacatcttcgccatc
ggcgacctggtcggccagccgatgctggcgcacaaggcggtgcacgaaggccatgtcgcc
gccgaagtcgccgccggcgacgacaaggcgcgtttcgacgcccgcgtgatcccgggcgtg
gcctacaccgaccccgaggtcgcctgggtcggcctgaccgaggacgaggccaaggcgcgc
ggcgtggcggtcaagaagggcctgttcccgtggtccgcctcgggccgcgccatcgccaac
ggccgcgacgaaggcttcaccaagctgctgttcgacgcccagacgcaccgcatcctgggt
ggcggcatcgtcggcacgcatgccggcgacatgatcggcgaggtcgcgctggccatcgag
atgggcgccgacgaggtcgacatcggccgcacgatccacccgcacccgacgctgggagag
tcgctgggcctggccgccgaagccgcgcacggcagctgcaccgacctgccgccggcgcgg
cgctga
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