Rubrivivax gelatinosus: RGE_28220
Help
Entry
RGE_28220 CDS
T01803
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rge03016
]
RGE_28220 (truB)
Enzymes [BR:
rge01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RGE_28220 (truB)
Transfer RNA biogenesis [BR:
rge03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RGE_28220 (truB)
Prokaryotic type
RGE_28220 (truB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAL96161
UniProt:
I0HT24
LinkDB
All DBs
Position
complement(2995120..2996097)
Genome browser
AA seq
325 aa
AA seq
DB search
MSNARPPRLPRRALHGVLLLDKPIGWTSNDALQKTKGLLRAEKGGHTGTLDPLATGLLPL
CFGAATKFSQASLDADKRYTATLHLGRTTSTGDLEGEVVEERPVDCDRAAIDAVLARFTG
EIDQLPPMHSALKHQGRALYEYARQGVEVEREPRRVTIRSLAVLDWNSPTLVLDVECSKG
TYVRTLAEDIGRALGCGAHLSALRRTASGALSLQGAVTIAELEAMAPEARAALLHPVDCL
VADWPAVRLDEEDAGRFLSGQRRRIQHADAAAVRVYGPDPRAFLGSAHVTRGELIADRLL
SPPEVASQLGAPVPLTSATPAEAEA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcccgtcctccccgtttgccgcgccgtgccctgcacggcgtgctgctgctc
gacaagccgatcggctggacgagcaacgacgcgctgcagaagaccaagggtctgctgcgc
gcggagaagggcggccacaccggcacgctggacccgctggccaccgggctgctgccgctg
tgcttcggcgccgcgaccaagttctcacaggccagcctggacgccgacaagcgctacacc
gcgaccctgcacctgggccgcacgacgagcaccggcgacctcgaaggcgaagtcgtcgag
gagcgcccggtcgactgcgaccgcgccgcgatcgacgccgtgctggcgcggttcaccggc
gagatcgaccagctgccgccgatgcactcggcgctcaagcaccagggccgtgcgctctac
gagtacgcgcgccagggcgtcgaggtcgagcgcgagccgcgccgggtgacgatccgatcg
ctggccgtgctcgactggaactcgccgacgctggtgctcgacgtcgagtgcagcaagggc
acctacgtgcgcacgctggccgaggacatcggccgcgcgctcggctgcggcgcccacctg
tcggcgctgcgccgcaccgccagcggcgccttgtcgctgcagggcgcggtgacgatcgcc
gaactcgaggcgatggcgcccgaggcgcgcgccgcgctgctgcacccggtggactgcctc
gtcgccgactggcccgccgtgcgactggacgaggaggacgccggtcgtttcctcagcggc
cagcgccgccgcatccaacatgccgacgctgccgccgtgcgcgtctatggccccgatccg
cgcgcctttctcggcagcgcccacgtcacccgcggcgaactcatcgccgaccgcctgctg
agcccgcccgaagtggcgtcgcagctcggcgctcccgtcccacttacttccgccacgccc
gccgaggccgaggcctga
DBGET
integrated database retrieval system
