Rubrivivax gelatinosus: RGE_29210
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Entry
RGE_29210 CDS
T01803
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rge
Rubrivivax gelatinosus
Pathway
rge02020
Two-component system
rge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGE_29210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE_29210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rge03000
]
RGE_29210
Transcription factors [BR:
rge03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RGE_29210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
GntR
HTH_23
VMAP-M0
HTH_28
DUF1670
Motif
Other DBs
NCBI-ProteinID:
BAL96260
UniProt:
I0HTC3
LinkDB
All DBs
Position
3098034..3098738
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AA seq
234 aa
AA seq
DB search
MTTPVLTLEERQNIENGAWFAKLSPALRDDILERSHVRRLPDGAPLVARGARAEEWCGVA
RGAVRISTISLGGKQVTLTYAEPGVWFGDIALFDGLPRTHDADTHGETTLLVVRKPDFRE
LLARHVELYEALLRLNCRRLRLMFDHFEDVNTRPLQARLARQLLLLARSYGVEEGGELRI
GLQLAQEDLAQLLGASRQRVNQELKGFEREGAIRVEPTRLVVLAREKLMEIAER
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccccggttcttacactcgaagagcgccagaacatcgagaacggcgcatggttc
gccaagctctcccctgccctgcgcgatgacatcctcgaacgttctcacgtgcgccgcctg
cccgacggggcgccgctggtcgcccgcggcgcacgcgccgaggagtggtgcggcgtcgca
cgcggcgcggtacgcatcagcacgatctcgctgggcggcaagcaggtgacgctgacctac
gcggagcccggcgtctggttcggcgacatcgcgctgtttgacggcctgccgcgcacccac
gacgccgacacccacggcgagacgacgctgctcgtcgtgcgcaagcccgacttccgcgag
ctgctggcacgccacgtcgagctctacgaggcgctgctgcgcctgaactgccgccgcctg
cggctgatgttcgaccacttcgaggacgtcaacacgcgcccgctgcaggcccgcctggcg
cgccagctgctgctgctggcgcgcagctacggcgtcgaggaaggcggcgagctgcgcatc
ggcctgcagctggcgcaggaagacctggcgcagctgctgggcgcctcgcgccagcgcgtc
aaccaggagctgaagggtttcgaacgcgaaggcgcgattcgcgtcgagccgacgcgcctg
gtcgtgctggcgcgcgagaagctgatggagatcgccgaacgctga
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