Rubrivivax gelatinosus: RGE_31050
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Entry
RGE_31050 CDS
T01803
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rge03009
]
RGE_31050
Enzymes [BR:
rge01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RGE_31050
Ribosome biogenesis [BR:
rge03009
]
Prokaryotic type
ribosomal protein modification factors
RGE_31050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BAL96444
UniProt:
I0HTV7
LinkDB
All DBs
Position
complement(3297542..3298930)
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AA seq
462 aa
AA seq
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MQETVPTVAFASLGCPKALTDSELILTQLAAEGYRTSKSFAGADLVIVNTCGFIDDAVKE
SLDTIGEALAENGRVIVTGCLGARAGDDGGNMVQQVHPKVLAVTGPHATQEVMDAVHRHV
PKPHDPFVDLVPEVRAEFRGEAGIKLTPRHYAYLKISEGCNHRCSFCIIPTMRGDLVSRP
VGEVLSEARALFENGVKELLVVSQDTGAYGVDAQYRTGFWDGRPVKTRFADLCEQLATLA
EAHGAWVRLHYVYPYPHVDDVLPLMAEGRILPYLDVPFQHAHPDVLKRMKRPASGERNLE
RLARWRELCPELVVRSTFIAGFPGETEAEFQTLLDFVAEAQIDRAGCFAYSPVAGAPANE
LPGALPHAVREERRARFMEVAEAVSVARLQRRVGQTMQVLVDHAPALGRKGGVGRSYADA
PEIDGTVRLLPPQKASRTLKVGEFVRARIVAAEGHDLVAMAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccgttccgaccgtcgccttcgcctcgctgggctgtcccaaggcgctgacc
gactccgagctgatcctcacccagctcgccgccgagggctaccgcacctcgaagtccttc
gccggcgccgacctcgtcatcgtcaacacctgcggcttcatcgacgacgccgtcaaggag
agcctggacacgatcggcgaggcgctggccgagaacggccgcgtcatcgtcaccggctgc
ctgggcgcacgcgccggcgacgacggcggcaacatggtgcagcaggtgcaccccaaggtg
ctggccgtcaccggcccgcacgcgacgcaggaggtgatggacgcggtgcaccgccacgtg
cccaagccgcacgaccccttcgtcgacctcgtgcccgaggtgcgcgccgagttccgtggc
gaggccggcatcaagctgacgccgcgccactacgcgtatctcaagatcagcgaaggctgc
aaccaccgctgcagcttctgcatcatcccgacgatgcgaggtgacctggtctcgcgtccg
gtcggcgaggttctgagcgaagcccgtgcgctgttcgagaacggcgtcaaggagctgctg
gtcgtcagccaggacaccggcgcctacggcgtcgacgcccagtaccgcaccggcttctgg
gacggccgcccggtgaagacgcgtttcgccgacctctgcgagcagctggccacgctggcc
gaggcgcacggcgcctgggtgcggctgcactacgtctacccgtacccgcacgtcgacgac
gtgctgccgctgatggccgaaggccgcatcctgccgtacctggacgtgccgttccagcac
gctcatccggacgtgctcaagcgcatgaagcgcccggccagtggtgaacgcaacctcgaa
cgcctggcgcgctggcgcgagctgtgccccgagctcgtcgtgcgctcgaccttcatcgcc
ggtttccccggcgagaccgaggccgagttccagaccctgctggacttcgtcgccgaggcg
cagatcgaccgcgccggctgcttcgcctattcgccggtggccggtgcgccggccaacgag
ctgccgggcgccttgccccacgcggtgcgcgaggaacgccgcgcgcgcttcatggaagtc
gccgaggcggtgtcggtcgccaggctgcagcgccgcgtcggccagacgatgcaggtgctg
gtcgaccacgcgccggcgctgggccgcaagggcggcgtcgggcggagctatgccgacgcg
cccgagatcgacggcaccgtgcgcctgctgccgccgcagaaggcctcgcgcacgctgaag
gtcggcgagttcgtccgcgcgcgcatcgtcgccgccgagggccacgacctcgtcgccatg
gcgctctga
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