Rubrivivax gelatinosus: RGE_31630
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Entry
RGE_31630 CDS
T01803
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II AlkA
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGE_31630 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_31630 (alkA)
Enzymes [BR:
rge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RGE_31630 (alkA)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGE_31630 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
BAL96502
UniProt:
I0HU15
LinkDB
All DBs
Position
complement(3377900..3378556)
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AA seq
218 aa
AA seq
DB search
MSPRDQVLAVTPAYWDDACRHLSRRDRVMKKLIPRFGEARLESRGDAFTTLARSIVGQQI
SVKAAQSVWNKFSALVEGPATHLAPQAVNALDPLTMRAAGLSARKTEYLLDLARHFVDGT
VHVADWQQMDDEAIIAELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISLNYFS
GEPVSRAEAREVGEAWAPYRSVATWYIWRSLDPLPVSY
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcgtgaccaggtcctcgccgtgacgccggcctattgggacgacgcctgccgc
cacctgtcgcgccgcgaccgggtgatgaagaagctgatcccgcgtttcggcgaggcccgg
ctggaaagccgcggcgacgccttcacgacgctggcgcgttcgatcgtcggccagcagatc
tcggtgaaggccgcgcagtcggtgtggaacaagttctccgcgctggtcgaaggcccggcg
acgcacctcgcgccgcaggccgtcaacgcgctggacccgctgacgatgcgcgccgcaggg
ctgtcggcgcgcaagaccgaatacctgctcgacctggcgcgccatttcgtcgacggcacg
gtgcacgtcgccgactggcagcagatggacgacgaggcgatcatcgccgagctcgttgcg
atccgcggcatcggccgctggaccgccgagatgttcctgatcttccacctgatgcgaccg
aacgtcctgccgctggacgacctcggcctgctgaagggcatcagcctcaactacttcagc
ggcgagccggtgtcgcgtgccgaggcgcgcgaggtcggcgaggcgtgggcaccgtaccgc
tcggtggccacttggtatatttggcggagcctggatccgcttcccgtgagttattag
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