Rubrivivax gelatinosus: RGE_32120
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Entry
RGE_32120 CDS
T01803
Symbol
ldcA
Name
(GenBank) muramoyltetrapeptide carboxypeptidase LdcA
KO
K01297
muramoyltetrapeptide carboxypeptidase [EC:
3.4.17.13
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rge01002
]
RGE_32120 (ldcA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
RGE_32120 (ldcA)
Enzymes [BR:
rge01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
RGE_32120 (ldcA)
Peptidases and inhibitors [BR:
rge01002
]
Serine peptidases
Family S66
RGE_32120 (ldcA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
Precursor biosynthesis
Carboxypeptidase
RGE_32120 (ldcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S66C
Peptidase_S66
DUF569
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
BAL96551
UniProt:
I0HU64
LinkDB
All DBs
Position
complement(3422966..3423928)
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AA seq
320 aa
AA seq
DB search
MTPHTDHEHGPGCDCGHEAPAAQTLWLYTPAGALQSAPALRRAAKRLARLGYEVTTDASA
LARQQRFAGDDETRLAAIHRVAEAAPSIALATRGGYGMTRLLDRLDWALLARSVEQGTRW
VGHSDLTALQLGMLAHGGARSWTGPMAANDFGRDEAAGGVDEVTEGCFVEAMSGELEAVG
FRTEAGFDGLSANGTLWGGNLTVLCSLLGTPHWPRIRGGVLFLEDVAEHPYRVERMLLQL
LQAGVLGAQKAVLLGSFSDWKPVKSDRGYKLKTVVEYLRAQTGVPVLTGLPIGHVPTMVT
LPVGAKVELVVQGRDVLVGW
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccccccataccgatcacgaacacggccccggctgcgactgcggccacgaagcgccc
gcagcgcagacgctgtggctgtacacgccggccggcgcgctgcagtcggccccggcactt
cgccgcgccgccaaacgcctggccaggctgggctacgaagtcacgaccgacgcctcggcg
ctggcgcggcagcagcgtttcgccggcgacgacgagacgcggctggcggccatccaccgt
gtcgccgaggccgcgccgtcgatcgcgctggccacgcgcggcggctacggcatgacgcgg
ctgctcgaccggctggactgggcgctgctggcgcgcagcgtcgagcagggtacgcgctgg
gtcggccacagcgacctgacggcgctgcagctgggcatgctggcacacggcggcgcgcgc
agctggaccgggccgatggcggccaacgacttcggccgcgacgaggccgccggcggtgtc
gacgaggtcaccgaaggctgtttcgtcgaggcgatgagcggcgagctcgaggccgtgggt
ttccgcaccgaggccggttttgacggcctgtcggccaacggcacgttgtggggcggcaac
ctgacggtgctgtgctcgctgctgggcacgccgcactggccccgcatccgggggggcgtg
ctgttcctcgaagacgtcgccgagcacccctaccgcgtcgagcgcatgctgctgcaactg
ctgcaggctggcgttctcggggcgcagaaggccgtgctgctgggcagcttcagcgactgg
aaaccggtcaagtccgaccgtggctacaagctgaagaccgtcgtcgagtacctgcgcgcg
cagaccggcgtgccggtgctcaccgggctgccgatcggccacgtgccgacgatggtgacg
ctgccggtgggggccaaagtcgaactcgtcgtgcaaggtcgcgacgtactcgtcggttgg
taa
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