Rubrivivax gelatinosus: RGE_33780
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Entry
RGE_33780 CDS
T01803
Name
(GenBank) HemN C-terminal domain containing protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00860
Porphyrin metabolism
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01240
Biosynthesis of cofactors
Module
rge_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE_33780
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
RGE_33780
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GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
BAL96717
UniProt:
I0HUN0
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All DBs
Position
complement(3605376..3606782)
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AA seq
468 aa
AA seq
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MRTPSPTDDPHGDRPSPSVLKIANLDAGASMCWQPSPASNPLVQGMPLGGNPSARALYEA
ALRGLADRPDEPLAVSARVPFCAAHCFCCDRDIRAAQPDEVIDDYVAGLVEEIREVAQVL
GGRRELLQFHLGGGTASELTGSQLARLVQAMQSQWRMPADIDMSCECDPRRVSQTMFEVL
RGLGFRRVSLGVLDLDPNVQQAIGRRQSAALIDDVCELARSAGIEYINLDLMIGLPRQTM
ASWCATVDRLIAMGPERIRLARYRHQPWHAPAQVAIDTESLPSPALMAELARASAEMLRN
AGYRWIGADQFVLEHDELSRAMDDGRLRRSLISYTAAPATPMIGLGVGAVGEIDGAMFWN
DGSQAAWRNALRHLHLPVSQARPATPESVQRRAAVERLLCTLELAAADAVGLEDGYGRLA
AREAEGLVRVLDDRIVVTEAGRHALHALCTDLDEPGAQPEGRSARCGC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgccctctcccacagacgacccccatggcgatcgtccctcgcccagcgtgctg
aagatcgcgaacctcgacgccggcgcctcgatgtgctggcagccgtccccggcctccaac
ccgctcgtgcagggcatgccgctcggtggcaatccttcggcgcgtgcgctctacgaggcc
gcgctgcgcggcctggccgatcgtcccgacgaaccgctggcggtctcggcgcgcgtgccg
ttctgcgccgcgcactgcttctgctgcgaccgcgacatccgcgccgcccagcccgacgag
gtcatcgacgactacgtcgccggcctggtcgaggagatccgcgaggtcgcccaggtgctg
ggcgggcgtcgcgaactgctgcagttccacctcggcggcggcaccgccagcgaactcacc
ggctcgcagctcgcgcgcctggtgcaggcgatgcagtcgcagtggcgcatgccggcggac
atcgacatgtcctgcgaatgcgaccctcgccgcgtcagccagacgatgttcgaggtgctg
cgcgggctgggcttccgccgcgtctcgctgggcgtgctcgacctcgacccgaacgtgcag
caggccatcggccggcgccagtcggcggcgctgatcgacgacgtctgcgaactcgcgcgt
tcggccggcatcgagtacatcaacctcgacctgatgatcggcctgccgcgccagacgatg
gccagctggtgcgccacggtcgaccgcctgatcgcgatgggccccgagcgcatccgcctg
gcgcgctaccgccaccagccctggcacgcgccggcgcaggtggcgatcgacaccgagtcg
ctgccgtcgccggcgctgatggccgagctggcgcgcgccagcgccgagatgctgcgcaac
gccggctaccgctggatcggcgccgaccagttcgtgctcgaacacgacgagctctcgcgt
gcgatggacgacggccgcctgcgccgcagcctgatctcctacaccgccgcgccggccacg
ccgatgatcggcctgggcgtcggcgcggtcggcgagatcgacggcgcgatgttctggaac
gacggctcgcaggccgcgtggcgcaacgcgctgcgccacctgcacctgccggtctcgcag
gcccggccggcgacgcccgagagcgtgcagcgccgggccgcggtcgaacgcctgctgtgc
acgctggagctggccgcggccgatgccgtcggcctggaagacggttacggccgcctggcc
gcgcgcgaggccgagggcctggtgcgtgtgctcgacgaccgcatcgtcgtcaccgaggct
ggacgccacgcgctgcacgcgctgtgcaccgatctcgacgaacccggcgcgcagccggaa
gggaggtccgcccggtgcggttgctga
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