Rubrivivax gelatinosus: RGE_34140
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Entry
RGE_34140 CDS
T01803
Symbol
crp
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rge
Rubrivivax gelatinosus
Pathway
rge02020
Two-component system
rge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGE_34140 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE_34140 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rge03000
]
RGE_34140 (crp)
Transcription factors [BR:
rge03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RGE_34140 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_24
TrmB
HTH_Cmi2_C
MarR
MarR_2
DUF7343
RepL
Rrf2
FeoC
DUF6293_C
Motif
Other DBs
NCBI-ProteinID:
BAL96753
UniProt:
I0HUR6
LinkDB
All DBs
Position
complement(3649188..3649856)
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AA seq
222 aa
AA seq
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MSMLSNLDLIRRVPLFSMLTAEQAQSIADSVVKRRFRRGELVVEQGRKSNALFILLNGRA
RVLTSDSRGREVILAVLESGDYVGEMSLIDGEPHSATVRAEIQTDMLVLQRADFARCLPE
GSTLSYAILRGLVRRLRNADRQIESLALLDVYGRVARTLLDMAEDDKGTKIIRHKVSRQD
MAKVVGASREMVSRVMKDLEDRGVIETQENGSVIIKERLQTD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatgctctcgaacctggatctgatccggcgcgtgccgctgttctcgatgctgacg
gccgaacaggcccagtcgatcgccgacagcgtcgtcaagcgccgcttccgccgtggcgaa
cttgtcgtcgagcaggggcgcaagagcaatgcgctgttcatcctgctcaacggccgggcg
cgcgtgctgacctccgactcgcgcggccgcgaagtcatcctggcggtgctggagtccggc
gactacgtcggcgagatgagcctgatcgacggcgagccgcactcggccaccgtgcgcgcc
gagatccagaccgacatgctggtgctgcagcgcgccgacttcgcgcgctgcctgcccgag
ggctcgacgctgtcctacgccatcctgcgcggcctggtgcgccggctgcgcaacgccgac
cggcagatcgagtcgctggcgctgctggacgtctacggccgcgtcgcccgcacgctgctg
gacatggccgaggacgacaagggcacgaagatcatccgccacaaggtctcgcgtcaggac
atggccaaggtcgtgggcgcctcgcgcgagatggtcagccgggtcatgaaggacctggag
gaccgcggcgtcatcgagacccaggagaacggctcggtgatcatcaaggaacggctgcag
accgactga
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