Rubrivivax gelatinosus: RGE_34990
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Entry
RGE_34990 CDS
T01803
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP+) GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00250
Alanine, aspartate and glutamate metabolism
rge00310
Lysine degradation
rge00350
Tyrosine metabolism
rge00650
Butanoate metabolism
rge00760
Nicotinate and nicotinamide metabolism
rge01100
Metabolic pathways
rge01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RGE_34990 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RGE_34990 (gabD)
00310 Lysine degradation
RGE_34990 (gabD)
00350 Tyrosine metabolism
RGE_34990 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RGE_34990 (gabD)
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RGE_34990 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RGE_34990 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RGE_34990 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAL96838
UniProt:
I0HV01
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Position
3741948..3743417
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AA seq
489 aa
AA seq
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MTSPLAQLKDPSLLKSGGLVDGEWIAGSTSFAVHDPATGAELAQVANLGATDCAAAIAAA
ERAWPVWRAKTAKERGAVLMRWFALLHQNADDLARLMTAEQGKPLAEARGEVTYGASFIE
WFAEEARRVYGETIPTTDGNKRYLVIRQPVGVCAAITPWNFPIAMITRKVAPALAAGCPV
IVKPAEQTPLSALAVAELAQRAGMPAGVFNVLPADAANSIEIGNVLCSSDVVRHLSFTGS
TEVGRILMKQCAPTIKKLSLELGGNAPFIVFDDADLDSAVEGALVSKYRNAGQTCVCANR
LYAQAGIHDAFVEKLAARARQIAVGNGFDAGVQLGPLIDDQAMAKVEAHVADALAQGARL
VTGGERVGDRFYAPTVLADVTPAMRCSKEETFGPIAPVIRFETEAEAVELANATEFGLAS
YFYSRDIGRIWRVSEALEYGMVGVNTGLISTAEVPFGGVKQSGLGREGARQGIDDYLESK
YVCLGDILK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccccgctggcgcaactgaaggacccctcgctgctgaagagcggcggcctcgtc
gacggcgaatggatcgccggcagcacgagcttcgccgtgcacgacccggccaccggcgcc
gagctggcgcaggtcgccaacctcggcgcgaccgactgcgccgccgccatcgccgccgcc
gaacgcgcctggcccgtctggcgcgccaagaccgccaaggaacgcggcgcggtgctgatg
cgctggttcgcgctgctgcaccagaacgccgacgacctggcgcggctgatgaccgccgaa
cagggcaagccgctggccgaagcgcgtggcgaagtgacctacggcgccagcttcatcgag
tggttcgccgaggaggcgcgccgcgtctacggcgagaccatcccgaccaccgacggcaac
aagcgctatctggtgatccgccagccggtcggcgtctgcgcggcgatcacgccctggaac
ttccccatcgcgatgatcacgcgcaaggtcgcgccggcgctggccgccggctgcccggtg
atcgtcaagccggccgagcagacgccgctgtcggcgctggccgtggccgagctggcgcag
cgcgccggcatgcccgccggcgtcttcaacgtgctgccggccgacgccgcgaactcgatc
gagatcggcaacgtgctgtgctccagcgacgtcgtgcgccacctgtccttcaccggcagc
accgaggtcggccgcatcctgatgaagcagtgcgcgccgacgatcaagaagctgtcgctg
gaactcggcggcaacgcgccgttcatcgtcttcgacgacgccgacctggacagcgccgtc
gaaggcgcgctggtcagcaagtaccgcaacgccggccagacctgcgtctgcgccaaccgc
ctgtacgcccaggccggcatccacgacgccttcgtcgagaagctggcggcgcgtgcgcgc
cagatcgccgtcggcaacggtttcgacgccggcgtgcagctggggccgctgatcgacgat
caggcgatggccaaggtcgaggcccatgtcgccgacgcgctggcgcagggcgcgcgcttg
gtgaccggcggcgaacgtgtcggcgaccgcttctatgcgccgacggtgctggccgacgtg
acgccggcgatgcgctgctcgaaggaagagaccttcggcccgatcgcgccggtcatcagg
ttcgagaccgaggccgaggccgtcgagctggccaacgccaccgagttcggcctggcgagc
tatttctacagccgcgacatcggccgcatctggcgcgtctcggaggcgctggagtacggc
atggtgggcgtcaacaccggcctgatctcgaccgccgaggtgccgttcggcggcgtcaag
cagtcgggcctgggccgcgaaggcgcgcgccagggcatcgacgactatctcgagagcaag
tacgtctgcctgggcgacatcctgaagtaa
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