Rubrivivax gelatinosus: RGE_36060
Help
Entry
RGE_36060 CDS
T01803
Symbol
cbbL
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbL
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00630
Glyoxylate and dicarboxylate metabolism
rge00710
Carbon fixation by Calvin cycle
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01120
Microbial metabolism in diverse environments
rge01200
Carbon metabolism
Module
rge_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rge_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGE_36060 (cbbL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RGE_36060 (cbbL)
Enzymes [BR:
rge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
RGE_36060 (cbbL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BAL96945
UniProt:
I0HVA8
LinkDB
All DBs
Position
complement(3846262..3847743)
Genome browser
AA seq
493 aa
AA seq
DB search
MNKPHEPGATGDQILDKKQRYSAGVLKYRQMGYWDSDYVPKATDVVCLFRITPQEGVDPI
EAAAAVAGESSTATWTVVWTDRLTACDSYRAKAYKVEPVPGRPGEYFAWVAYDLILFEEG
SIANMTASLIGNVFSFKPLKAARLEDIQIPVAYVKTFKGPPTGLIVERERLDKFGRPLLG
ATTKPKLGLSGRNYGRVIYEGLKGGLDFMKDDENINSQPFMHWRDRFLYVMDGVNKASAA
TGEVKGSYLNVTGATMEDIYERAEFAKELGSVVIMVDLIIGWSAIQSIANWARKNDMIVH
MHRAGHGTYTRQKNHGVSFRVMAKWLRLAGVDHLHTGTAVGKLEGDPLTVQGYYNVCRDA
YTKQDLPRGLFFDQDWADLRKVMPVASGGIHAGQMHQLIDLFGDDVILQFGGGTIGHPAG
IQAGAVANRVALEAMVKARNEGRDIKNEGPEILQKAAQFCTPLKQALDTWKDVSFNYAST
DQSDYAVTPATSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccgcatgaacccggcgccaccggcgaccagatcctggacaagaagcagcgc
tacagcgccggcgtcctgaagtaccgtcagatgggctactgggacagcgactacgtgccc
aaggccaccgacgtggtctgcctgttccgcatcacgccgcaggaaggcgtggacccgatc
gaagccgccgccgccgtggccggcgagtccagcaccgcgacctggaccgtggtctggacc
gaccgcctgaccgcctgcgacagctaccgcgccaaggcctacaaggtcgagccggtgccg
ggccggcccggcgagtacttcgcctgggtggcctacgacctgatcctgttcgaagaaggc
tcgatcgcgaacatgaccgcgagcctgatcggcaacgtcttcagcttcaagccgctgaag
gccgcgcggctggaggacatccagatcccggtggcctacgtcaagaccttcaagggcccg
ccgaccggcctgatcgtcgagcgcgagcgcctggacaagttcggccgcccgctgctgggt
gcgacgaccaagcccaagctgggcctgtcgggccgcaactacggccgcgtgatctacgaa
ggcctgaagggcggcctggacttcatgaaggacgacgagaacatcaactcgcagcccttc
atgcactggcgtgaccgcttcctctacgtgatggacggcgtcaacaaggccagcgccgcg
accggcgaggtcaagggctcgtacttgaacgtcaccggcgcgacgatggaagacatctac
gagcgtgccgagttcgccaaggaactgggcagcgtcgtgatcatggtcgacctgatcatc
ggctggagcgccatccagtcgatcgccaactgggcgcgcaagaacgacatgatcgttcac
atgcaccgcgccggccacggcacctacacgcgccagaagaaccacggcgtcagcttccgt
gtgatggccaagtggctgcgcctggcgggtgtcgaccacctgcacaccggcaccgcggtc
ggcaagctcgaaggcgacccgctgaccgtgcagggctactacaacgtctgccgcgacgcc
tacaccaagcaggacctgccgcgcggcctgttcttcgaccaggactgggccgacctgcgc
aaggtcatgccggtggcctcgggcggcatccacgccggccagatgcaccagctgatcgac
ctgttcggcgacgacgtgatcctgcagttcggcggcggcaccatcggccacccggcgggc
atccaggccggtgcggtcgccaaccgcgtcgcgctcgaagcgatggtcaaggcgcgcaac
gaaggccgcgacatcaagaacgaaggccccgagatcctgcagaaggcggctcagttctgc
actccgctaaagcaggcgctggacacctggaaggacgtgtcgttcaactacgccagcacc
gaccagtccgactacgccgtcaccccggccacctctgcctga
DBGET
integrated database retrieval system
