Rubrivivax gelatinosus: RGE_36070
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Entry
RGE_36070 CDS
T01803
Symbol
cbbR
Name
(GenBank) HTH-type transcriptional regulator CbbR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rge03000
]
RGE_36070 (cbbR)
Transcription factors [BR:
rge03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RGE_36070 (cbbR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
BAL96946
UniProt:
I0HVA9
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Position
3847841..3848764
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AA seq
307 aa
AA seq
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MNVTFRQLRVFVEVARQGSVQGAAEVLHLTPPAVSLQIKEIESQVGHRLFERTHRRMSLS
TAGEYFLVYARRLLGTLKEAEDAMARFARLESGRLTIGMVSSAKYFLPQLLAKFHTEHPA
IDVRLRLGNREALVAMMAANEVDLCVMGRPPVDFASRAEPFAKHPHVLVTAPDHRFAHAE
SVPASALANEPFIVREPASGTRTALQEYLDQFRLKPTFVMEMPSNEAIKQAVMAGMGVSL
LSLHTIGLEWSAGLIAAPHVEGLPLMRRWNIVNTAAKQLSPAAEAFRYFILDRGEAHLAA
MFSRADQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcaccttccgccagctgagggtcttcgtcgaggtcgcacgccagggcagcgtg
caaggcgcggccgaggtgctgcacctgacgccgcccgcggtctcgctgcagatcaaggaa
atcgagtcgcaggtcggccacaggctgttcgagcgaacgcaccgccgcatgtcgctgtcg
accgccggcgagtacttcctggtctacgcgcgccgcctgctgggcacgctgaaggaagcc
gaggacgcgatggcgcgtttcgcccggctggagagcggccggctgacgatcggcatggtc
agcagcgccaagtacttcctgccgcagctgctggccaagttccacaccgagcacccggcg
atcgacgtgcgcctgcgcctgggcaaccgcgaggcgctggtggcgatgatggcggccaac
gaggtcgacctctgcgtgatgggccgtccgccggtggacttcgccagccgcgccgagccc
ttcgccaaacacccgcacgtgctggtcaccgcgccggaccaccgcttcgcgcacgccgag
agcgtgcccgcctcggcgctggccaacgagcccttcatcgtgcgcgagccggcttcgggc
acgcgcaccgcactgcaggagtacctggaccagttccgcctgaagccgaccttcgtgatg
gagatgcccagcaacgaggccatcaaacaggcggtgatggccggcatgggcgtgagcctg
ctgtcgctgcacacgatcggcctggaatggtcggccgggctgatcgccgcgccgcacgtc
gaaggcctgccgctgatgcggcgctggaacatcgtcaacaccgcggccaagcagctgtcg
ccggccgccgaggccttccgctacttcatactcgaccgcggcgaggcccatctggcggcg
atgttcagccgcgcggaccagtag
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