Rubrivivax gelatinosus: RGE_37110
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Entry
RGE_37110 CDS
T01803
Name
(GenBank) putative ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RGE_37110
09124 Replication and repair
03420 Nucleotide excision repair
RGE_37110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rge03021
]
RGE_37110
03036 Chromosome and associated proteins [BR:
rge03036
]
RGE_37110
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_37110
Enzymes [BR:
rge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RGE_37110
Transcription machinery [BR:
rge03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RGE_37110
Chromosome and associated proteins [BR:
rge03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RGE_37110
DNA repair and recombination proteins [BR:
rge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RGE_37110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BAL97050
UniProt:
I0HVL3
LinkDB
All DBs
Position
3962337..3964622
Genome browser
AA seq
761 aa
AA seq
DB search
MTDTPDATPAYTVPVRALCAFAAKTGDLDLRFTPAPSAAEGVAGHRRVAARRGPGHESEV
ALEGRWQQLRVRGRADGVDLGRALVEEVKTHRGPVDRIPEHHRALHRAQARVYAALLAAA
HALPRVTVRVLYWDVDRESETTFDETLTAAELQAHFEALCSRFAAWADAEIAHRAARDAA
LAALAWPHDAFRAGQRELATAVYNAARAGRPLLAQAPTGIGKTMATLFPTLKALPGQRLD
RVFFLAAKTPGRRLALDALAALRAGGARPLRVLQLVARDKACAEPGRACHGDDCRLARGF
YDRLPAARQAALGALEHDPEALPAVAADHAVCPYYLAQEMARWADVVVGDFNYVFDSGAL
LHALLQENGWRAVALVDEAHNLVSRAREMYSATLDAAAVRAAKRNAPAALKRPVERVARA
LGALAKAGDAPFEVADAAPDKLLDALRNYISAASELAVQQPTALAGDALQLHFDALRFAE
LAELLDPATSQFDLTRRPSARGHPEAVACVRCVVPAPFIKPRFEALHTAVLFSATLAPAP
YQRDLLGLGEGAAWLDCESPFDAAQLAVRIAPLSTRYADREASLAPLAALIARQYAEMPG
NYLAFFSSFDYLERTATALQAAAPELPLRCQQRRMDEAERRAFIDSFAEGGRQVGLAVLG
GAFGEGIDLPGSRLVGAFVATLGLPPVDAVQEAMKARLEARFGAGWAYTYLVPGLQKVVQ
AAGRVIRTPEDRGVLHLVDDRFGRAEVRALLPGWWRVRRGG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgcccgacgccacccccgcctacaccgtgccggtgcgcgcgctgtgtgcg
ttcgcggccaagaccggcgacctggacctgcgcttcacgccagcgcccagcgccgccgaa
ggcgtggccggccaccgccgcgtcgccgcgcgccgcggccccgggcacgagagcgaggtc
gcgctggaaggccgctggcagcagctgcgcgtgcgcggccgcgccgacggcgtcgacctg
ggccgggcgctggtcgaggaggtcaagacgcaccgcggcccggtcgatcgcatccccgag
caccaccgcgcgctgcaccgcgcccaggcgcgggtctacgccgcgctgctggccgccgcg
cacgcgctgccgcgtgtgacggtgcgcgtgctctactgggacgtcgaccgcgagagcgag
accaccttcgacgagacgctgaccgcggccgagctgcaggcccacttcgaggcgctgtgc
agccgcttcgccgcctgggccgacgccgagatcgcgcaccgcgccgcacgcgacgccgcg
ctcgcggcgctggcctggccgcacgacgctttccgcgccggccagcgtgaactggcgacc
gcggtctacaacgccgcgcgcgccggccggccgctgctggcccaggcgcccaccggcatc
ggcaagacgatggcgacgttgttcccgacgctgaaggccctgcccggccagcgcctggac
cgcgtcttcttcctcgccgccaagacgcccggccggcgcctggcgctggacgcgctggcc
gcgctgcgcgccggcggcgcacgcccgctgcgtgtgctgcagctcgtcgcgcgcgacaag
gcctgcgccgaacccggccgcgcctgccacggcgacgactgccggctggcgcgcggcttc
tacgaccgcctgccggcggcgcgccaggcggcgctgggcgcgctggagcacgaccccgag
gcgctgcccgccgtcgccgccgaccacgccgtctgcccctactacctggcgcaggagatg
gcgcgctgggccgacgtcgtcgtcggcgacttcaactacgtcttcgactccggcgcgctg
ctgcacgccttgctgcaggagaacggctggcgcgcggtggcgctggtcgacgaggcgcac
aacctcgtctcgcgggcacgcgagatgtacagcgcgacgctggacgccgccgccgtgcgc
gccgccaaacgcaacgcgccggccgcgctgaagcgccccgtcgaacgcgtggcgcgtgcg
ctgggcgcgctggcgaaagccggcgacgcgccgttcgaggtcgccgacgccgcgcccgac
aagctgctcgacgcgctgcgcaactacatctcggcggccagcgagctggcggtgcagcag
cccaccgcgctggccggcgacgcgctgcagctgcacttcgacgcgctgcgtttcgccgaa
ctggccgagctgctggacccggcgaccagccagttcgacctgacgcgccgccccagcgcg
cgcggccatcccgaggccgtggcctgcgtgcgctgcgtcgtgccggcgccgttcatcaag
ccgcgtttcgaggccctgcacaccgcggtgctgttctcggcgacgctggcgccggcgccc
taccagcgcgacctgctcggcctgggcgaaggcgcggcctggctggactgcgagtcgccg
ttcgacgccgcgcagctggcggtgcgcatcgcgccgctgtccacgcgttatgccgaccgc
gaggcttcgctggcgccgctggcggcgctaatcgcgcgccagtacgccgagatgccgggc
aactacctcgccttcttcagcagcttcgactacctggaacgcaccgccaccgcgctgcag
gccgccgcgcccgagctgccgctgcgctgccagcagcgtcgcatggacgaagccgaacgc
cgcgccttcatcgattccttcgccgaaggcgggcgccaggtcggcctggcggtgctgggc
ggcgccttcggcgaaggcatcgacctgccgggctcgcgcctcgtgggcgccttcgtcgcg
acgctgggcctgccgccggtggacgccgtgcaggaggcgatgaaagcgcggctggaagcg
cgcttcggcgccggctgggcctacacctacctcgtgcccgggctgcagaaggtggtgcag
gccgccgggcgcgtgatccgcacaccggaggaccgcggcgtgctgcacctcgtcgacgac
cgtttcggccgcgccgaggtccgggcgctgctgcccgggtggtggcgggtgcggcggggc
ggctga
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