Rubrivivax gelatinosus: RGE_40100
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Entry
RGE_40100 CDS
T01803
Name
(GenBank) thiol-activated cytolysin family protein
KO
K11031
thiol-activated cytolysin
Organism
rge
Rubrivivax gelatinosus
Pathway
rge02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE_40100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
rge02042
]
RGE_40100
Bacterial toxins [BR:
rge02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
RGE_40100
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Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
BAL97346
UniProt:
I0HWF9
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All DBs
Position
complement(4315391..4316806)
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AA seq
471 aa
AA seq
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MSVVLDRPDTEVTANTAYIQGLSYDLNQLLAVDLTPAELDPASAGETRAHEGGRVVIVTK
RLHDASSRLTENLLLNPAAGVVFPGALVKQDRSLAEGMPTPYTLSRRPIRLRVDLPGLEE
RGVVEVERPTAVSVDLAIQKIVDTWFQDVQHAQGYRPPMRAFSESHTAYSKEQIGVECGF
GAQWGRSQATAGLKVGSTGDETVVYRVFKQIYFSVVVEEPDEAGLLFAPGVSLGPVNMPS
SAPPGLVRCVDYGRLIVVQMSTQQHVTAQEAEATLDYKSQGLKVSAEMQERYDRIARASS
FRVLVLGGGDSAADLVAGDVDAMSAAISKGIEFSRTNLAHPIAYMVADLRSRATSQIRST
TRYVETIREVLADHTVTMRHTGGFVASFNARWEQYDEESKQFKATEWHSGDHTAPYEAML
QMRGDVRNLVVEGRYAIFFKTWRSKFKSYDCLTSDRTIHLWGGTLNAHLDD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtcctcgatcgtcccgataccgaagtgacggccaacacggcgtacatccag
gggctgtcctacgacctcaaccagttgctggcggtcgacctgacgccggcggaactcgac
ccggcgtcggccggtgaaacccgcgcccacgagggcggccgcgtggtcatcgtgaccaag
cggctgcacgacgcgagttcccgcctcaccgagaacctgctgctgaaccctgccgccggc
gtcgtcttccctggcgccctggtcaagcaggaccgcagcctggccgagggcatgccgacg
ccctacaccttgtcgcggcggccgatccgcctgcgtgtcgacctgccggggctggaggag
cgcggcgtggtcgaagtcgaacgcccgacggccgtctcggtggacctggcgatccagaag
atcgtcgacacctggttccaggacgtccagcacgcccagggctaccggccgccgatgcgc
gcgttctcggagtcgcacacggcgtattcgaaggagcagatcggcgtcgagtgcgggttc
ggcgcgcagtggggccgcagccaggcaacggccgggctgaaggtcggcagcaccggcgac
gagaccgtggtctaccgcgtcttcaagcagatctacttctcggtggtggtcgaagagccc
gacgaggccggcctgctgttcgcgcccggggtcagcctggggccggtgaacatgccgtcc
agcgcgccgcccgggctcgtgcgctgcgtcgactacggccggctgatcgtcgtccagatg
agcacccagcagcacgtcacggcgcaggaggccgaggcgacgctggactacaagtcgcag
gggctgaaggtcagcgccgagatgcaggagcgttatgaccgcatcgcccgggcgtcgtcg
ttccgggtgctggtgctcggcggtggcgactcggcggccgatctcgtcgccggcgacgtc
gacgcgatgagcgccgcgatctccaagggcatcgagttctcgaggaccaacctcgcccac
ccgatcgcctacatggtggccgacctgcgcagccgcgccacgtcgcagatccggtcgacg
acacgttacgtcgagacgatccgcgaggtgctcgccgaccacacggtgacgatgcgccac
accggcggcttcgtcgccagcttcaacgcgcgctgggagcagtacgacgaggagtcgaag
cagttcaaggccacggagtggcactcgggcgaccacacggcgccttacgaggcgatgctg
cagatgcgcggtgacgtgcgcaacctggtcgtcgaaggtcgttatgcgatcttcttcaag
acctggcggtccaagttcaagagctacgactgcctgaccagtgaccgcacgatccacctg
tggggtggcacgctgaacgcccacctcgacgactga
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