Rubrivivax gelatinosus: RGE_40990
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Entry
RGE_40990 CDS
T01803
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RGE_40990 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rge03019
]
RGE_40990 (rnc)
03009 Ribosome biogenesis [BR:
rge03009
]
RGE_40990 (rnc)
03036 Chromosome and associated proteins [BR:
rge03036
]
RGE_40990 (rnc)
Enzymes [BR:
rge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RGE_40990 (rnc)
Messenger RNA biogenesis [BR:
rge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RGE_40990 (rnc)
Ribosome biogenesis [BR:
rge03009
]
Eukaryotic type
90S particles
RNase
RGE_40990 (rnc)
Prokaryotic type
rRNA processing factors
RGE_40990 (rnc)
Chromosome and associated proteins [BR:
rge03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RGE_40990 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAL97435
UniProt:
I0HWP8
LinkDB
All DBs
Position
complement(4404950..4405654)
Genome browser
AA seq
234 aa
AA seq
DB search
MDTRHDALQQRLGHRFERTGLLTRALTHRSWGADHNERLEFLGDSVLNCAVSALLYERFS
GSDEGDLTRVRAHLVREDSLHRVALTLGLPEVLRMSEGEMRGGGAQRPSILADAVEALIG
AIFLDGGYEPALAAVRRLFGEVIAATEADAWTKDAKTELQEWLQARRLPVPAYRIVATRG
EKHAQTFEVECAVATLGLAERGEGRSRRTAEQEAARRLLEGLKADDKPGGPLRS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggacacccggcacgacgccctgcagcaacggctcggtcaccgcttcgagcgcaccggc
ctgctgacgcgcgcgctcacgcaccgcagctggggcgcggaccacaacgagcgcctcgaa
ttcctcggcgactcggtgctcaactgcgccgtctcggcgctgctgtacgaacgtttctcc
ggcagcgacgaaggcgacctgacgcgcgtgcgcgcccacctcgtgcgcgaggacagcctg
caccgcgtcgcgctgactttgggcctgcccgaggtgctgcgcatgtccgaaggcgagatg
cgcggcggtggcgcccagcggccgtcgatcctcgccgatgccgtcgaggcgctgatcggc
gcgatcttcctggacggcggctacgagccggcgctggctgccgtgcgccgcctcttcggc
gaggtcatcgccgccaccgaggccgacgcctggaccaaggacgccaagaccgagctgcag
gaatggctgcaggcgcggcgcctgccggtgccggcctaccgcatcgtcgccacgcgcggc
gagaagcacgcccagaccttcgaggtcgagtgcgccgtcgccacgctgggcctcgccgaa
cgcggcgaaggccgctcccgccgcaccgccgagcaggaggccgcgcgccgcctgctcgaa
ggcttgaaagccgacgacaaacccggcggccccttgcgctcctga
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integrated database retrieval system