KEGG   Rubrivivax gelatinosus: RGE_40990
Entry
RGE_40990         CDS       T01803                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rge00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RGE_40990 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rge03019]
    RGE_40990 (rnc)
   03009 Ribosome biogenesis [BR:rge03009]
    RGE_40990 (rnc)
   03036 Chromosome and associated proteins [BR:rge03036]
    RGE_40990 (rnc)
Enzymes [BR:rge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RGE_40990 (rnc)
Messenger RNA biogenesis [BR:rge03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RGE_40990 (rnc)
Ribosome biogenesis [BR:rge03009]
 Eukaryotic type
  90S particles
   RNase
    RGE_40990 (rnc)
 Prokaryotic type
  rRNA processing factors
   RGE_40990 (rnc)
Chromosome and associated proteins [BR:rge03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RGE_40990 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: BAL97435
UniProt: I0HWP8
LinkDB
Position
complement(4404950..4405654)
AA seq 234 aa
MDTRHDALQQRLGHRFERTGLLTRALTHRSWGADHNERLEFLGDSVLNCAVSALLYERFS
GSDEGDLTRVRAHLVREDSLHRVALTLGLPEVLRMSEGEMRGGGAQRPSILADAVEALIG
AIFLDGGYEPALAAVRRLFGEVIAATEADAWTKDAKTELQEWLQARRLPVPAYRIVATRG
EKHAQTFEVECAVATLGLAERGEGRSRRTAEQEAARRLLEGLKADDKPGGPLRS
NT seq 705 nt   +upstreamnt  +downstreamnt
atggacacccggcacgacgccctgcagcaacggctcggtcaccgcttcgagcgcaccggc
ctgctgacgcgcgcgctcacgcaccgcagctggggcgcggaccacaacgagcgcctcgaa
ttcctcggcgactcggtgctcaactgcgccgtctcggcgctgctgtacgaacgtttctcc
ggcagcgacgaaggcgacctgacgcgcgtgcgcgcccacctcgtgcgcgaggacagcctg
caccgcgtcgcgctgactttgggcctgcccgaggtgctgcgcatgtccgaaggcgagatg
cgcggcggtggcgcccagcggccgtcgatcctcgccgatgccgtcgaggcgctgatcggc
gcgatcttcctggacggcggctacgagccggcgctggctgccgtgcgccgcctcttcggc
gaggtcatcgccgccaccgaggccgacgcctggaccaaggacgccaagaccgagctgcag
gaatggctgcaggcgcggcgcctgccggtgccggcctaccgcatcgtcgccacgcgcggc
gagaagcacgcccagaccttcgaggtcgagtgcgccgtcgccacgctgggcctcgccgaa
cgcggcgaaggccgctcccgccgcaccgccgagcaggaggccgcgcgccgcctgctcgaa
ggcttgaaagccgacgacaaacccggcggccccttgcgctcctga

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