Rubrivivax gelatinosus: RGE_42040
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Entry
RGE_42040 CDS
T01803
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase Phr
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_42040 (phr)
Enzymes [BR:
rge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RGE_42040 (phr)
DNA repair and recombination proteins [BR:
rge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RGE_42040 (phr)
Prokaryotic type
RGE_42040 (phr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAL97540
UniProt:
I0HX03
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All DBs
Position
4504958..4506463
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AA seq
501 aa
AA seq
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MKNSIDHALVWLRRDLRTDDHAALYHALRAARRVWCVFLFDRDILDALPRADRRVEFIRD
SVVGVDAELRALAASHGIEGAGLIVRHGRALEQIPRLAAALGVQAVFASHDDEPEALVRD
ARVRGALADAGVAFHSMKDHVVFERDEVLTQGGGPFSVFTPYRNAWLKKLDDFYLASYPV
ERHAGALAPKPAGETLPTLAEIGFETTNLHALKLPSGPAGGRELLADFLERIDHYADWRD
FPAVKGPSYLGPHLRFGTLSIRRLAREAHQRSTAGSRGAEIWLSELIWREFYHQLLHHHP
RVVGGCFKPEYDRLHWEHGKHADELFAAWCEGRTGYPIVDAAMHQLTRTGYMHNRLRMIS
ASFLTKDLGIDWRRGEAWFARHLNDFDLASNNGGWQWAASTGCDAQPYFRIFNPVAQSER
FDPEGRFIRRYLPQLARLPDALLHAPWRARPADLAAAGVVLGRDYPEPVVAHDEARERTL
ARFAAVKPVKPRVAMARSRAD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaacagcatcgaccacgccctcgtctggctgcgccgcgacctgcgcaccgacgac
cacgcggccctgtaccacgcgctgcgcgccgcccggcgcgtctggtgcgtcttcctgttc
gaccgcgacatcctggacgcgctgccgcgtgccgaccggcgcgtggagttcatccgcgac
agcgtcgtcggcgtcgacgccgagctgcgtgcgctggcggcctcgcacggcatcgaaggc
gccgggctgatcgtgcgccacggccgggcgctggagcagatcccgcgcttggcagcggcg
ctcggcgtgcaggcggtcttcgccagccacgacgacgagcccgaggcgctggtccgcgac
gcccgcgtgcgcggcgcgctggccgacgccggcgtcgctttccacagcatgaaagaccac
gtggtcttcgagcgcgacgaggtgctgacccagggcggcggcccgttctcggtgttcacg
ccctaccgcaacgcctggctgaagaagctcgacgacttctatctcgcgtcctacccggtc
gagcgtcacgccggcgcgctggcccccaaacccgccggcgagacgctgccgacgctggcc
gagatcggcttcgagaccaccaacctgcacgcgctgaagctgcccagcggcccggcgggc
ggccgcgagctgctggccgacttcctggagcgcatcgaccactacgccgactggcgcgac
ttcccggccgtcaaggggccgagctacctgggcccgcacctgcgtttcggcacgctgtcg
atccgccgcctggcgcgcgaggcgcaccagcgttcgacggccggctcgcgcggtgccgag
atctggctgtcggagctgatctggcgcgagttctatcaccagctgctgcaccaccacccg
cgagtcgtcggcggctgcttcaagcccgagtacgaccggctgcactgggaacacggcaaa
cacgccgacgaactcttcgccgcctggtgcgagggccgcaccggttacccgatcgtcgac
gcggcgatgcaccagctcacgcgcaccggctacatgcacaaccggctgcgcatgatcagc
gccagcttcctgaccaaggacctcggcatcgactggcgccgcggcgaagcctggttcgcg
cgccacttgaacgacttcgacctggcatcgaacaacggcggctggcagtgggctgcctcg
accggctgcgacgcccagccctatttccgcatcttcaacccggtcgcccagagcgaacgt
ttcgaccccgaggggcgcttcatccgccgctacctgccgcagctggccaggctgcccgac
gccctgctgcacgcgccctggcgcgcccgcccggccgacctggccgccgccggcgtcgtg
ctcggccgcgactaccccgaaccggtcgtcgcccacgacgaagcacgcgaacgcacactc
gcccgttttgccgccgtcaagccggtaaaaccccgagtcgcgatggcccgcagccgcgcc
gactga
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