KEGG   Rubrivivax gelatinosus: RGE_42320
Entry
RGE_42320         CDS       T01803                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase, alpha subunit NrdA
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge00230  Purine metabolism
rge00240  Pyrimidine metabolism
rge01100  Metabolic pathways
rge01232  Nucleotide metabolism
Module
rge_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rge_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rge00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RGE_42320 (nrdA)
   00240 Pyrimidine metabolism
    RGE_42320 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rge03400]
    RGE_42320 (nrdA)
Enzymes [BR:rge01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RGE_42320 (nrdA)
DNA repair and recombination proteins [BR:rge03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RGE_42320 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: BAL97568
UniProt: I0HX31
LinkDB
Position
complement(4539756..4542611)
AA seq 951 aa
MQAVQSSATEAVVPVRSQAAAPAAASVTGYQIIRRNGSVVAFEPNKIAVALMKAFLAVHG
AQGAASASVRETVDQLTEGVVRALVRSRPGGGTFHIEDVQDQVELGLMRGGHHEVARAYV
LYRERRAQERSRQAAAPKPAAPELHVVDRGQRVPLDLEGLRSLVEQACAGLGDDVRAEPI
LAETRRNLYDGVPLDEVYKASILAARTLIEKDPAYTRATARLLLHTIRREILGADVRPEA
MAARYAEYFPEYVRQGVQAELLDEELQRFDLVRLGAALKPERDLQFDYLGLQTLYDRYFL
HVDGRRIELPQAFFMRVAMGLALNEIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQ
LSSCYLTTVADDLEGIYEALKENALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPF
LKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPD
LFMKRVMEGGDWTLFSPSSCPDLHDKFGAAFEDAYVAYERKADQGEMRPFKRLPAKDLWR
KMLTMLFETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTSASEIAVCNLGSINL
AQHVAGGGIDQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGLMGFQDCL
YQLRLPYASEAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGVLPQDTLD
LLAAARGGHVEVDRSETLDWAALRARIAAHGMRNSNCVAIAPTATISNIIGVDASIEPCF
GNLSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAIDRVPDELKQLYA
TAFEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKTTYYLRTM
SATHAEKSTVAPGAMNAVPQHGGLDASAAAAEPASDVRFCSIDNPDCEACQ
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcaagcagtccagtcgtccgcgaccgaggccgtcgtgcccgtgcgcagccaggccgcc
gcgccggccgccgcgtccgtcaccggctaccagatcatccgccgcaacggctcggtcgtc
gccttcgagcccaacaagatcgcggtcgcgctgatgaaggccttcctggccgtgcacggc
gcgcagggcgcggcctcggccagcgtgcgcgagacggtggaccagctgaccgaaggcgtg
gtgcgcgcgctggtgcgttcgcgcccgggcggcggcaccttccacatcgaggacgtgcag
gaccaggtcgaactcggcctgatgcgcggtggccaccacgaggtcgcacgcgcctacgtg
ctctaccgcgagcgccgtgcgcaggagcgttcgcgccaggccgccgcgcccaagccggca
gcgcccgagctgcacgtcgtcgatcgcggccagcgtgtgccgctggacctggagggcctg
cgttcgctggtcgaacaggcctgcgccgggctgggcgacgacgtgcgcgccgagcccatc
ctcgccgagacccgccgcaacctctacgacggggtgccgctggacgaggtctacaaggcg
tcgatcctcgccgcgcgcacgctgatcgagaaggacccggcctacacgcgcgccaccgcg
cggctgctgctgcacacgatccgccgcgagatcctgggcgccgacgtgcgccccgaggcg
atggccgcacgctacgccgagtatttccccgagtacgtgcgccagggcgtgcaggccgag
ctgctcgacgaagagctgcagcgcttcgacctcgtgcgtctgggcgcggcgctcaagccc
gagcgcgacctgcagttcgactacctcggcctgcagacgctgtacgaccgctacttcctg
cacgtcgacggccggcgcatcgagctgccgcaagccttcttcatgcgcgtcgcgatgggc
ctggcgctcaatgagatcgaccgcgaggcgcgtgcgatcgagttctacgacgtgctctcc
agcttcgacttcatgtcctcgacgccgacgctgttcaacagcggcacgcggcgttcgcag
ctgtcgtcttgctacctgacgacggtggccgacgacctggaaggcatctacgaggcgctg
aaggagaacgcgctgctgtccaagttcgccggcggcctgggcaacgactggaccccggtg
cgtgcgctgggcagccacatcaagggcaccaacggcaagagccagggcgtcgtgcccttc
ctgaaggtcgtcaacgacaccgcggtggccgtcaaccagggcggcaagaggaagggcgcg
gtctgcgcgtatctggagacctggcacctggacatcgaggagttcctcgagctgcgcaag
aacaccggtgacgaccgccggcgcacgcacgacatgaacaccgcgaactggatcccggac
ctgttcatgaagcgcgtgatggaaggcggcgactggacgctgttctcgccgtcgagctgc
cccgacctgcacgacaagttcggtgccgccttcgaggacgcctacgtcgcctacgaacgc
aaggccgaccagggcgagatgcgcccgttcaagcgcctgccggccaaggacctgtggcgc
aagatgctgacgatgctcttcgagaccgggcatccgtggatcaccttcaaggacgcctgc
aacctgcgcagcccgcagcagcacgtcggcgtcgtgcactccagcaacctgtgcaccgag
atcacgctgaacaccagcgccagcgagatcgcggtctgcaacctcggctcgatcaacctc
gcccagcacgtcgccggcggcggcatcgaccaggccaagctcaagcgcacggtgtcgacg
gcgatgcgcatgctcgacaacgtcatcgacatcaactactacgcggtgaagaaggcgcgc
gacgccaacctgcgccaccgcccggtcggcctggggctgatgggtttccaggactgcctg
taccagctgcgcctgccctacgccagcgaggccgcggtcgagttcgccgaccgctcgatg
gaagcgctctgctaccacgcctactgggcctcgagcgagctggccgaggagcgtggccgc
tactccagctaccgcggctcgctctgggaccgcggcgtgctgccgcaggacacgctggac
ctgctggccgcggcgcgtggcggccacgtcgaggtcgaccgcagcgagacgctggactgg
gcggcgctgcgcgcgcgcatcgccgcgcacggcatgcgcaactccaactgcgtggccatc
gcgccgacggcgacgatctccaacatcatcggcgtcgacgcctcgatcgagccctgcttc
ggcaacctctcggtgaagagcaacctgtcgggcgagttcaccgtcgtcaacgagtacctg
gtgcgcgacctgaagcgcctgggcctgtgggacgacgtgatggtgatggacctgaagcac
ttcgacggctcgctgcgcgccatcgaccgcgtgcccgacgagctcaagcagctctacgcc
accgccttcgaggtcgatgcgcgctggctggtcgaggccgcggcgcggcgccagaagtgg
atcgaccaggcgcagtcgctgaacatctacatggccggcgcctcgggcaagaagctcgac
gagatctacaagctcgcctggacgcgcggcctgaagaccacctactacctgcgcacgatg
agcgccacgcacgccgagaagagcacggtggcaccgggcgcgatgaatgccgtgccgcag
cacggcggtctcgacgcctcggcggcggcggccgagccggcgagcgacgtgcgcttctgc
tcgatcgacaaccccgattgcgaagcctgccagtaa

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