Rubrivivax gelatinosus: RGE_44720
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Entry
RGE_44720 CDS
T01803
Symbol
topB
Name
(GenBank) DNA topoisomerase III TopB
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rge03032
]
RGE_44720 (topB)
Enzymes [BR:
rge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RGE_44720 (topB)
DNA replication proteins [BR:
rge03032
]
Prokaryotic type
DNA Topoisomerases
RGE_44720 (topB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
Zn_Ribbon_YjdM
DUF5323
IBR_2
Motif
Other DBs
NCBI-ProteinID:
BAL97808
UniProt:
I0HXS1
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Position
complement(4789004..4791598)
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AA seq
864 aa
AA seq
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MTKTLIIAEKPSVAQDIARALTPVAGKFEKHADHFENDQYVVTSAVGHLVEIKAPEAYDV
KRGKWSFAHLPVVPPHFELAPIDKSKSRLSAVVKLVKRKDVTDLVNACDAGREGELIFRL
IVQYAAAGKPFTKPIRRLWLQSMTPQAIRDGFDKLRSDEQMQGLADAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKHVARDYWEVRAAFDAQAGQ
YEGKWFDPKWKKNPDDAEARADRLWNEADAQAIAAAVRGQPATVTEEAKPSSQSSPLLYD
LTTLQREANSRFGFSAKTTLSIAQALYEKHKVLTYPRTDSRALPEDYVAVVKQTFAMLAE
EELPGPLAALSQHARKGLDAGYVKPTKRVFDNTKVSDHFAIIPTLQAPKSLTEIEAKLYD
LVVKRFIAVFYPAAEYMVTTRISKVATAGATHHFQTNGKVLVNPGWLAVYGKEAQDEDAN
LVPVTQGETVRTEGVDVKQLKTKPPARYTEATLLSAMEGAGKLIDDDELRQAMAEKGLGT
PATRAAIIEGLILEKYMLREGRELVPTAKAFQLMTLLRGLAIEDLTKPELTGNWEYQLSQ
MEHGKLSRERFMAEIAKMAERIVKKAKEYDRDTIPGDYATLASPCPNCGGVVKENYRRFA
CIGAAGSPEGSGCGFSITKLPAGRTFELAEADALLRDKRLGPLEGFRSKAGWPFSAELRI
VRDEEIGNWKLEFDFGDDDKPAEGEGEPVDFSGQQSLGPCPKCRSHVYEHGTSYVCEHAV
GPHATCDFKSGAVILQQPVTHEEMTRLLTTGRTKLLEDFVSNKTKRKFKAFLVYDTKEGK
VGFEFEPRAARPPAKKAPARKTAA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagactctcatcattgcggagaagcccagcgtcgcgcaggacatcgcgcgtgcg
ctgacgccggtcgccggcaagttcgagaaacacgccgaccatttcgagaacgaccagtac
gtcgtcacctcggcggtcggccacctcgtggagatcaaggctcccgaggcctacgacgtc
aagcgcggcaagtggagcttcgcccatctgccggtggtgccgccgcacttcgagctggcg
ccgatcgacaagtccaagtcgcggctgtcggcggtggtcaagctggtcaagcgcaaggac
gtcaccgatctcgtcaacgcctgcgacgcggggcgcgaaggcgagctgatcttccgcctg
atcgtccagtacgccgcggccggcaagcccttcaccaagccgatccgccgcctgtggctg
cagagcatgacgccgcaggccatccgcgacggcttcgacaagctgcgcagcgacgagcag
atgcagggcctggccgacgccgcgcgcagccgttccgaggcggactggctggtcggcatc
aacggcacgcgcgcgatgacggccttcaactcgcgcgacggcggcttcttcctcaccacg
gtgggccgggtgcagacgccgacgctgtcgatcgtcgtcgagcgcgaggagaagatccgc
aagcacgttgcacgcgactactgggaagtgcgcgccgccttcgacgcccaggccgggcag
tacgagggcaagtggttcgacccgaagtggaagaagaaccccgacgacgccgaagcgcgt
gccgaccgcctgtggaacgaggccgacgcccaggccatcgccgccgccgtgcgcggccag
ccggccaccgtcaccgaggaagccaagcccagctcgcagagcagcccgctgctctacgac
ctgacgacgctgcagcgcgaggccaactcgcgcttcggtttctcggccaagacgacgctg
tcgatcgcccaggcgctgtacgaaaagcacaaggtgctgacctacccgcggaccgactcg
cgcgcgctgcccgaggactacgtggccgtcgtcaagcagaccttcgcgatgctcgccgag
gaagagctgccgggcccgctggcggcgctgtcgcagcacgcgcgcaaggggctggacgcc
ggctacgtgaagcccaccaagcgtgtcttcgacaacaccaaggtctcggaccacttcgcc
atcatcccgacgctgcaggccccgaagagcctgaccgagatcgaggccaagctctacgac
ctggtcgtcaagcgcttcatcgccgtgttctatccggcggccgagtacatggtcacgacg
cgcatcagcaaggtcgcgacggccggcgcgacgcaccacttccagaccaacggcaaggtg
ctggtcaacccgggctggctggcggtctacggcaaggaagcccaggacgaggacgccaac
ctggtgccggtgacgcaaggcgagaccgtgcgcaccgagggcgtggacgtcaaacagctg
aagaccaagccgccggcgcgctacaccgaagcgacgctgctgtcggcgatggaaggcgcg
ggcaagctgatcgacgacgacgagctgcgccaggccatggccgagaagggcctgggcacg
ccggcgacgcgcgccgcgatcatcgaaggcctgatcctcgagaagtacatgctgcgtgaa
ggccgcgagctggtgcccaccgccaaggccttccagctgatgacgctgctccgcggcctg
gcgatcgaggacctgaccaagcccgagctgaccggcaactgggagtaccagctgtcgcag
atggagcacggcaagctgagccgcgagcgcttcatggccgagatcgccaagatggccgag
cgcatcgtcaagaaggccaaggaatacgaccgcgacacgattcccggcgactacgcgacg
ctggcctcgccctgcccgaactgcggcggcgtggtcaaggagaactaccgccgcttcgcc
tgcatcggcgccgccggttcgcccgaaggtagcggctgcggcttcagcatcaccaagctg
ccggccggccgcaccttcgagctcgccgaggccgacgcgctgctgcgcgacaagcgcctg
ggcccgctggaaggcttccgttccaaggccggctggccgttcagcgccgagctgcgcatc
gtgcgcgacgaggagatcggcaactggaagctggagttcgacttcggcgacgacgacaag
cccgccgaaggcgaaggcgagccggtggacttcagcggccagcagagcctgggcccgtgc
ccgaagtgccgcagccatgtctacgagcacggcacgagctacgtctgcgagcacgccgtc
ggcccgcacgcgacctgcgacttcaagagcggcgccgtgatcctgcagcagccggtgacg
cacgaggagatgacgcgcctgctgaccaccggccgcaccaagctgctcgaggacttcgtc
tcgaacaagaccaagcgcaagttcaaggccttcctcgtctacgacaccaaggaaggcaag
gtcggtttcgagttcgagccgcgtgccgcgcggccgccggcgaagaaggcgccggcacgc
aagaccgcggcgtga
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