KEGG   Rubrivivax gelatinosus: RGE_45970
Entry
RGE_45970         CDS       T01803                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
rge  Rubrivivax gelatinosus
Pathway
rge02020  Two-component system
rge02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RGE_45970
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    RGE_45970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rge03021]
    RGE_45970
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:rge02035]
    RGE_45970
Transcription machinery [BR:rge03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RGE_45970
Bacterial motility proteins [BR:rge02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    RGE_45970
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3
Other DBs
NCBI-ProteinID: BAL97930
UniProt: I0HY43
LinkDB
Position
4923893..4924810
AA seq 305 aa
MISLEGVPSALVARNQSWVRQQAQSLVRHLPANVEKADLIQVGLIAVAQASLSFVWEGDP
ESEEAREAFARYARQRVRGAMIDELRQMDVLTRAQRRKIKVMQIARERWRSKNGTEPGLA
ELARLCKMDVDEIALLEQLAQASQQRSSSGGDDDEPDFAERHHPATEKDEVEARVDTAIV
LRHLETFFAQLPERERQVIDAYLGVGMTPVELAASLKVTPSRVSQMYHGLLRRMAVRFGH
APQQRATDRARRPSRADMEALVAQRERDLQAQPEAGPWGEMMEDVLVSPAERFGIRIDVP
PGTRW
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatctcgctggagggggtgccgtcggccctggtggcccgcaatcagagctgggtgcgt
cagcaggcgcagtcgctggtgcggcatttgccggccaacgtggagaaggccgacctgatc
caggtcgggctgatcgccgtcgcgcaggcctcgctcagcttcgtctgggagggcgacccg
gagtccgaagaggcgcgcgaagccttcgcgcgctacgcccgccagcgcgtgcgcggcgcg
atgatcgacgagctgcgccagatggacgtgctgacgcgcgcccagcgccgcaagatcaag
gtgatgcagatcgcgcgcgaacgctggcgctcgaagaacggcaccgaacccggcctcgcc
gagctggcgcggctgtgcaagatggacgtcgacgagatcgcgctgctcgagcagttggcc
caggccagccagcagcgcagcagctccggcggcgacgacgacgaacccgacttcgccgaa
cgccaccacccggcgaccgagaaggacgaggtcgaggcgcgcgtggacaccgcgatcgtg
ctgcgccacctggagaccttcttcgcccagctcccggagcgcgagcgccaggtcatcgac
gcctacctgggcgtcggcatgacgccggtggaactggccgcctcgctgaaggtgacgccg
tcacgcgtgtctcagatgtaccacgggctgctgcgccgcatggcggtgcgtttcggccac
gcgccgcagcagcgtgccaccgaccgggcacgccgccccagccgcgccgacatggaagcg
ctggtcgcgcagcgcgagcgcgatctgcaggcgcagcccgaagccgggccgtggggcgag
atgatggaagacgtgctggtctcgcccgccgaacgcttcggcatccgcattgacgtgccg
cccgggacgcgctggtaa

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