Rubrivivax gelatinosus: RGE_46110
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Entry
RGE_46110 CDS
T01803
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00061
Fatty acid biosynthesis
rge00071
Fatty acid degradation
rge01100
Metabolic pathways
rge01212
Fatty acid metabolism
rge02024
Quorum sensing
rge04146
Peroxisome
Module
rge_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGE_46110 (fadD)
00071 Fatty acid degradation
RGE_46110 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGE_46110 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGE_46110 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rge01004
]
RGE_46110 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rge04147
]
RGE_46110 (fadD)
Enzymes [BR:
rge01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGE_46110 (fadD)
Lipid biosynthesis proteins [BR:
rge01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RGE_46110 (fadD)
Exosome [BR:
rge04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGE_46110 (fadD)
Exosomal proteins of breast cancer cells
RGE_46110 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAL97944
UniProt:
I0HY57
LinkDB
All DBs
Position
complement(4937115..4938782)
Genome browser
AA seq
555 aa
AA seq
DB search
MEKIWLKQYPAGVPAEVSVELYPSLVALLEESFGKYRELPAYKFMGRTVSFREVDEVSRA
FAAYLQSLGLARGDRVAIMMPNVPQYPVAVAAILRAGYVIVNVNPLYTPRELEHQLKDSG
AKAIIILETFAATLQKVYDAVPTKKVIVAAMGDMLGLLKGAIVNHVVRKVKKMVPAWDIP
GAVRFPDAVARGRNKPLAPTKVGPDDIAVLQYTGGTTGVSKGAILLHRNLVANVLQSEAW
YQPALKKIPAGEQIVTVCALPLYHIFGFTANMMLSMRMGGCNILIPNARDFPSTLKELSK
HRFHSFPAVNTLFNALANHPDFGTVDWSHLKISVGGGMAVQHATAKLWLEKTGCPICEGY
GLSETSPSATCNPVDTDAYSGAIGLPLPSTDVCLLDDEGREVPPGVAGEIAIKGPQVMAG
YWQRPDETAKVMTVDGFFRTGDVGLVDERGYFRIVDRKKDMILVSGFNVYPNEVEDVITQ
MPGVLECAAVGVPDAKAGEAVKVVIVKKDPAVSEADVRAFCEANLTGYKRPKIVEFRSDL
PKTPVGKILRRELRT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatctggctgaagcagtacccggcgggcgtgcctgccgaagtgagcgtcgag
ctgtacccctcgctcgtcgccctgctggaggagagcttcggcaagtatcgcgagctgccg
gcctacaagttcatgggccgcaccgtgagcttccgcgaggtcgacgaggtctcgcgggcc
ttcgccgcctacctgcagtcgctgggcctggcgcgcggcgaccgcgtggcgatcatgatg
cccaacgtgccgcagtacccggtggccgtcgcggccatcctgcgggccggttacgtcatc
gtcaacgtcaacccgctgtacacgccgcgtgagctggagcaccagctcaaggactccggc
gccaaggccatcatcatcctcgagaccttcgccgcgacgctgcagaaggtctacgacgcg
gtgccgacgaagaaggtgatcgtcgccgcgatgggcgacatgctcggcctgctgaagggc
gcgatcgtcaatcacgtcgtgcgcaaggtgaagaagatggtgccggcctgggacatcccg
ggcgcggtgcgcttccctgatgccgtcgcgcgcggccgaaacaagccgctagcgccgacc
aaggtcggccccgacgacatcgccgtgctgcagtacaccggcggcaccaccggcgtcagc
aagggcgcgatcctgctgcaccgcaacctggtcgccaacgtgctgcagtccgaggcctgg
taccagccggcgctgaagaagatcccggctggcgagcagatcgtcaccgtctgcgcgctg
ccgctctatcacatcttcggcttcacggcgaacatgatgctgtcgatgcgcatgggcggg
tgcaacatcctgatccccaacgcgcgcgacttcccgtccacgctcaaggagctgtccaag
caccgcttccacagcttcccggcggtcaacacgctgttcaacgcgctggccaaccacccg
gacttcggcaccgtcgactggagccacctgaagatcagcgtcggcggtggcatggcggtg
cagcacgccaccgccaagctctggctggagaagaccggctgcccgatctgcgaaggctac
ggcctgtcggagaccagcccgtcggcgacctgcaacccggtcgacaccgatgcctacagc
ggcgccatcggcctgccgctgccgtccaccgacgtctgcctgctcgacgacgaaggccgc
gaagtcccgcccggcgtcgccggcgagatcgcgatcaagggcccgcaggtgatggccggc
tactggcagcgccccgacgagaccgccaaggtgatgactgtcgacggcttcttccgcacc
ggcgacgtcggcctggtcgacgaacgcggctacttccgcatcgtcgaccgcaagaaggac
atgatcctggtctcgggcttcaacgtctacccgaacgaggtcgaggacgtcatcacgcag
atgcccggcgtgctcgaatgcgccgccgtcggcgtgcccgacgccaaggccggcgaggca
gtcaaggtggtcatcgtcaagaaggacccggcggtcagcgaagccgacgtgcgcgccttc
tgcgaagccaacctgacgggctacaagcggccgaagatcgtcgagttccgcagcgacctg
cccaagaccccggtcggcaagatcctgcggcgcgagctgcgcacctga
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