Rubrivivax gelatinosus: RGE_46350
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Entry
RGE_46350 CDS
T01803
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein Ssb
KO
K03111
single-strand DNA-binding protein
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03030
DNA replication
rge03430
Mismatch repair
rge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGE_46350 (ssb)
03430 Mismatch repair
RGE_46350 (ssb)
03440 Homologous recombination
RGE_46350 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rge03032
]
RGE_46350 (ssb)
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_46350 (ssb)
03029 Mitochondrial biogenesis [BR:
rge03029
]
RGE_46350 (ssb)
DNA replication proteins [BR:
rge03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGE_46350 (ssb)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RGE_46350 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
RGE_46350 (ssb)
Mitochondrial biogenesis [BR:
rge03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
RGE_46350 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
XopA_Hpa1
DUF3127
SSB_1
Motif
Other DBs
NCBI-ProteinID:
BAL97968
UniProt:
I0HY81
LinkDB
All DBs
Position
complement(4961661..4962161)
Genome browser
AA seq
166 aa
AA seq
DB search
MASVNKVILVGNLGRDPEVRYAPSGSAICNVTIATSRQWKDKTSGERQEETEWHRVVFYD
RLAEIAGEYLKKGRPVYVEGRLKTRKWTDKDGVEKYTTEIIAMEMQLLGGREGGGGGGGD
YGGGDDMGAPPARRAPAPRPQAPAPRAPAPQKSSTGFDDMDDDIPF
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtcaacaaagtcatcctcgtcggcaacctcggccgcgaccccgaagtgcgc
tacgcccccagcggctcggcgatctgcaacgtcaccatcgccaccagccgccagtggaag
gacaagaccagcggcgagcgccaggaagagaccgaatggcaccgcgtggtcttctacgac
cgcctggccgagatcgccggcgagtacctgaagaagggccgcccggtctacgtcgaaggc
cgtctgaagacgcgcaagtggaccgacaaggacggcgtcgagaagtacacgaccgaaatc
atcgcgatggaaatgcagctgctcggcggccgtgaaggcggcggcggtggcggcggcgac
tacggcggtggcgacgacatgggcgcgccgccggcccgccgcgccccggcaccgcgcccg
caggcccccgcgccgcgcgcgccggcgccgcagaagtcgagcaccggcttcgacgacatg
gacgacgacattccgttctga
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integrated database retrieval system
