Rubrivivax gelatinosus: RGE_46360
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Entry
RGE_46360 CDS
T01803
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGE_46360 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rge03019
]
RGE_46360 (recQ)
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_46360 (recQ)
Enzymes [BR:
rge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGE_46360 (recQ)
Messenger RNA biogenesis [BR:
rge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGE_46360 (recQ)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RGE_46360 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
BAL97969
UniProt:
I0HY82
LinkDB
All DBs
Position
4962350..4964263
Genome browser
AA seq
637 aa
AA seq
DB search
MSPAPVEADPAQQVLHEVFGYTAFRGRQREIVEHVAAGGDALVLMPTGGGKSLCYQVPAI
LRHRAGQGVTVVVSPLIALMHDQVGALDEVGVPAAFLNSTLDGDEARRIERELLAGRLVL
LYAAPERILTPRFLAMLESLAERDRLALFAIDEAHCVSQWGHDFREEYLGLSALHERFPQ
VPRMALTATADAHTREDIVARLKLEDARRFVSSFDRPNIRYTIVEKDEPKRQLLRFLRDE
HEGDAGIVYCQSRKKVEDTAAWLSAEGIPALPYHAGLDAETRRRHQDRFLREDALVMVAT
IAFGMGIDKPDVRFVAHLDLPKNIEAYYQETGRAGRDGLPADAWMTYGLADVVNQRRMID
EGEADEEFKHLQRGKLDALLALAEAHDCRRVRLLGYFGERYGGEDDGDDDSGAVPRLRCG
NCDNCLAPPATWDATEAARKALSCVYRFRQQGGQRFGAGHLVDVLRGKQTDKVAQYGHET
LSTFGIGADVAESQWRGVLRQLIALGHLRTEGEFNTLELTASAREVLRGEVQLLLRVPAE
TPRRGRTARTRGSADKPPPLPLDEAATARFTALKAWRGEVAREHNVPAYVVFHDATLAEM
ARERPQTLDDLAGISGVGAKKLEAYGEEILRVLRQGA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccgcccccgtcgaggccgatcccgcgcagcaggtgctgcacgaggtgttcggc
tacaccgccttccgcggccgccagcgcgagatcgtcgaacacgtggccgccggcggcgac
gccctggtgctgatgcccaccggcggcggcaagagcctgtgctaccaggtgccggcgatc
ctgcgccaccgcgccggccagggcgtcaccgtcgtcgtctcgccgctgatcgcgctgatg
cacgaccaggtcggcgcgctcgacgaagtcggcgtgccggccgccttcctgaacagcacg
ctcgacggcgacgaggcccggcgcatcgaacgcgagctgctcgccggccgcctggtgctg
ctctacgccgcgcctgaacgcatcctgacgccgcgcttcctggcgatgctcgagtcgctg
gccgaacgcgatcggctggcgctgttcgcgatcgacgaagcgcactgcgtcagccagtgg
ggccacgacttccgcgaggagtacctcggcctgtcggcgctgcacgagcgtttcccgcag
gtgccgcgcatggcgctgacggccaccgccgacgcccacacgcgcgaggacatcgtcgcg
cggctgaagctggaggacgcgcgccgcttcgtgtccagcttcgaccggccgaacatccgc
tacacgatcgtcgagaaggacgagcccaagcgccagctgctgcgtttcctgcgcgacgag
cacgagggcgacgccggcatcgtctactgccagagccgcaagaaggtcgaggacaccgcc
gcctggctcagcgccgaaggcatcccggcgctaccgtatcacgccggcctggacgccgag
acgcgccgccgccaccaggaccgcttcctgcgcgaggacgcgctggtgatggtcgcgacg
atcgccttcggcatgggcatcgacaagcccgacgtgcgtttcgtcgcccacctggacctg
cccaagaacatcgaggcctattaccaggagaccggccgcgccggccgcgacggcctgccc
gccgatgcctggatgacctacggcctggccgacgtcgtcaaccagcgccgcatgatcgac
gagggcgaggccgacgaggagttcaagcacctgcagcgcggcaagctcgacgcgctgctg
gcgctggccgaggcccacgactgccgccgcgtgcggctgctcggctacttcggcgagcgt
tatggcggcgaagacgacggcgatgacgactccggcgccgtgcccaggctgcgttgcggc
aattgcgacaactgcctggcgccgccggccacctgggacgccaccgaagccgcgcgcaag
gcgctgtcctgcgtctaccgcttccgccagcaaggcggccagcgtttcggcgccggccac
ctcgtcgacgtgctgcgcggcaagcagaccgacaaggtcgcgcaatacggccacgagacg
ctgtcgaccttcggcatcggcgccgacgtcgccgagtcgcagtggcgcggcgtgctgcgc
cagctgatcgcgctgggccatctgcgcaccgaaggcgagttcaacacgctggagctgacc
gccagcgcgcgcgaggtgctgcgcggcgaggtgcagctgctgctgcgcgtgccggccgag
acgccgcggcgcggccgcacggcgcgcacgcgcggcagcgccgacaagccgccgccgctg
ccgctggacgaagccgcgacggcgcgcttcacggcgctgaaagcctggcgcggcgaagtg
gctcgggagcacaatgttccggcctatgtcgtcttccacgacgcgacgctcgccgagatg
gcgcgcgagcgtccgcagaccttggacgacctggcgggcatcagcggcgtcggggcgaag
aaactcgaagcctacggggaggaaatccttcgcgtactgcggcaaggcgcttga
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