Rubrivivax gelatinosus: RGE_46700
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Entry
RGE_46700 CDS
T01803
Symbol
gatB
Name
(GenBank) putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00970
Aminoacyl-tRNA biosynthesis
rge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RGE_46700 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rge03029
]
RGE_46700 (gatB)
Enzymes [BR:
rge01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RGE_46700 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RGE_46700 (gatB)
Mitochondrial biogenesis [BR:
rge03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RGE_46700 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
BAL98003
UniProt:
I0HYB6
LinkDB
All DBs
Position
5002328..5003779
Genome browser
AA seq
483 aa
AA seq
DB search
MATFPLIRGYEVVIGFETHAQLSTESKIFSGASTRFGAEPNTQACPVDLALPGTLPVANR
GAVERAIRFGLAVGAKVAPLSIFARKNYFYPDLPKGYQISQYEIPVVQGGSVSFLLDGEK
RSVRLTRAHLEEDAGKSLHEDYHGQSGIDLNRAGTPLLEIVSEPDLRSSAEAVEYAKALH
ALVVWLGICDGNMQEGSFRCDANVSVRRPGEPFGTRREIKNLNSFRFLQQAIDFEVQWQI
DRLEDGLAIEQATVLFNPDTGETRAMRSKEDAHDYRYFPDPDLPPLVIAPDWVERVRAAM
PELPALMAERFQRDDGLPAYDAAMMTQSLAFARYYEAARDGCGQPKLVANWLMGEISKRL
NSEGVAIDAAPVGPETLAKLIGRIADGTVSNNGARQVFDALWSGEAAEVDAVIEAKGLKQ
MNDSGALEKIVDEVIAANAKSVEEFRAGKDKAFNALVGQVMKASKGKANPAQASELLRRK
LGG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttccccctcatccgcggctacgaagtcgtcatcggcttcgagacccatgcc
cagctctccaccgagagcaagatcttcagcggcgcctcgacgcgtttcggcgccgagccc
aacacccaggcctgcccggtcgacctggcgctgcccggcacgctgccggtggccaaccgc
ggcgccgtcgaacgcgcgatccgcttcggcctggccgtcggcgccaaggtcgcgccgctg
tcgatcttcgcgcgcaagaactacttctatcccgacctgcccaagggctaccagatcagc
cagtacgagatcccggtggtgcagggcggcagcgtctccttcctgctcgacggcgagaag
cgttcggtgcggctgacccgcgcccacctcgaggaagacgcgggcaagagcctgcacgag
gactaccacggccagtcgggcatcgacctgaaccgcgccggcacgccgctcctggagatc
gtctccgagcccgacctgcgcagctcggccgaggcggtggagtacgccaaggcgctgcac
gcgctcgtcgtctggctgggcatctgcgacggcaacatgcaggaaggcagcttccgctgc
gacgccaacgtctcggtgcgccgccccggcgagcctttcggcacgcgccgcgagatcaag
aacctcaacagcttccgcttcctgcagcaggccatcgacttcgaggtccagtggcagatc
gaccggctcgaagacggcctcgcgatcgagcaggcgacggtgctgttcaaccccgacacc
ggcgagacgcgggcgatgcgcagcaaggaagacgcgcacgactaccgctacttccccgac
cccgatctgccgccgctggtcatcgcgcccgactgggtggaacgcgtgcgcgccgcgatg
cccgagctgccggcgctgatggccgaacgcttccagcgcgacgacggcctgccggcctac
gacgcggcgatgatgacccagagcctggccttcgcgcgctactacgaggcggcgcgcgac
ggctgcggccagcccaagctggtcgccaactggctgatgggcgagatcagcaagcggctg
aactccgaaggcgtggcgatcgacgccgcgccggtgggcccagagacgctggccaagctg
atcggccgcatcgccgacggcacggtgtccaacaacggcgcgcgccaggtcttcgacgcg
ctgtggagcggcgaggccgccgaggtcgacgccgtcatcgaggccaagggcctcaagcag
atgaacgacagcggcgcgctggagaagatcgtcgacgaggtgattgccgccaacgccaag
tcggtcgaggagttccgcgccggcaaggacaaggccttcaacgcgctggtcggccaggtc
atgaaggccagcaagggcaaggccaatccggcgcaggccagcgaactgctgcgccgcaag
ctcggcggctga
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