Rubrivivax gelatinosus: RGE_47020
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Entry
RGE_47020 CDS
T01803
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rge03016
]
RGE_47020 (trmE)
Transfer RNA biogenesis [BR:
rge03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RGE_47020 (trmE)
Prokaryotic type
Methyltransferases
RGE_47020 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Arf
Ras
ABC_tran
Roc
Motif
Other DBs
NCBI-ProteinID:
BAL98035
UniProt:
I0HYE8
LinkDB
All DBs
Position
complement(5038888..5040252)
Genome browser
AA seq
454 aa
AA seq
DB search
MSLARLRDPIAAVATAAGRGAVGIVRASGPDLAPLVQALFGRALAPRAATLLPFTAADGS
VLDRGLAIHFPAPHSYTGEDVLELQAHGGPVLLQLLLARVLEAGAGIGLRLARAGEFTER
AFLNDKIDLAQAEAVADLIDASTEAAARSAARSLDGAFSAEIHTLAGRIVELRTLVEATL
DFPEEEIDFLEKARAHERLGAIEAAIGAALARARQGALLREGMRVVIAGQPNVGKSSLLN
ALAGAELAIVTPIPGTTRDRVAETIQIEGVPLHVVDTAGLREHAADEVERIGIGRSWEAI
AGADAVLFVHDLTRRGDAGYEAAEAEIATRLEGADVLHVHNKADAAAPAADDGVVLSAKA
GTGLETLRRELLRRAGWQAQPDGVFIARARHVDALQRTLAHLHLAQAHAAQRDAALDLLA
EELRLAHQALGEITGEFGTEDLLGEIFGRFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcccgattacgtgaccccatcgccgccgtcgccaccgctgccggccgcggc
gcggtcggcatcgtgcgcgcctccggccccgacctcgcgccgctggtgcaggcgctgttc
gggcgtgcgctggcgccgcgggcggcgacgctgctgcccttcaccgccgccgacggttcg
gtgctcgaccgcggtctggcgatccatttcccggcgccgcactcctacaccggcgaggac
gtgctggagctgcaggcccacggcggcccggtgctgctgcagctgctgctggcgcgtgtg
ctcgaagccggcgcgggcatcggcctgcggctggcgcgggccggcgagttcaccgaacgc
gcctttctcaacgacaagatcgacctcgcccaggccgaggcggtggccgacctgatcgac
gccagcaccgaggccgccgcgcgctcggcggcgcgttcgctggacggcgcgttctcggcc
gagatccacacgctggccgggcgcatcgtcgagctgcgcacgctggtcgaggcgacgctg
gacttccccgaggaggagatcgacttcctggagaaggcgcgggcccacgaacggctgggc
gcgatcgaagccgcgatcggcgccgcgctggcgcgcgcgcgccagggggcgctgctgcgc
gaaggcatgcgggtggtcatcgccggccagcccaacgtcggcaagagctcgctgctcaac
gcgctggccggcgccgagctggcgatcgtcacgccgatcccgggcacgacacgcgaccgc
gtcgccgagacgatccagatcgaaggcgtgccgctgcacgtcgtcgacaccgcggggctg
cgcgagcatgccgccgacgaggtcgaacgcatcggcatcggccgcagctgggaagcgatc
gcaggcgccgacgccgtgctcttcgtgcacgacctgacgcgccgcggcgacgctggctac
gaggccgccgaagccgagatcgccacgcgccttgagggcgccgacgtgctgcacgtgcac
aacaaggccgacgccgcggcaccggcggccgacgacggtgtcgtgctgtcggccaaggcc
ggcaccgggctggagacgctgcgccgcgagctgctgcgccgcgccggctggcaggcccag
cccgacggcgtcttcatcgcccgcgcgcgccacgtcgatgcgctgcagcgcacgctggcg
cacctgcatctggcccaggcgcacgccgcacagcgcgacgcggcgctggacctgctggcc
gaggaactgcgcctggcgcatcaggcgctgggcgagatcaccggcgagttcggcaccgag
gatctgctgggcgagatcttcgggcgcttctgcatcggcaagtag
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