Roseomonas gilardii: RGI145_00370
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Entry
RGI145_00370 CDS
T04615
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rgi
Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgi03032
]
RGI145_00370
03036 Chromosome and associated proteins [BR:
rgi03036
]
RGI145_00370
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_00370
DNA replication proteins [BR:
rgi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGI145_00370
Chromosome and associated proteins [BR:
rgi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RGI145_00370
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RGI145_00370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
APT55808
UniProt:
A0A1L7AAJ7
LinkDB
All DBs
Position
1:complement(83308..83634)
Genome browser
AA seq
108 aa
AA seq
DB search
MTRSELIAALAAANPHLRQPDVELIVATILEEISAALARGDRVELRGFGAFTAKRRDPRT
GRNPRTGEAVEVTGKAVPYFKPGKELRERVNGGPLQSRGGKERPSAGD
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaccagatcggagttgatcgccgcgctggccgcggcgaaccctcatctgcgccagccc
gatgtggaactgatcgtggccaccatcctggaggagatctccgccgccctggcgcggggc
gaccgggtggaattgcgcggcttcggcgccttcaccgccaagcgccgcgatccccggacc
ggccgcaacccccgcacgggggaggccgtggaagtcaccggcaaggcggtcccctatttc
aagccgggcaaggaattgcgcgaacgggtcaatggcggcccgttgcagagccgaggcggc
aaggagcgcccgtccgccggagactga
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integrated database retrieval system
