Roseomonas gilardii: RGI145_01005
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Entry
RGI145_01005 CDS
T04615
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03030
DNA replication
rgi03430
Mismatch repair
rgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGI145_01005
03430 Mismatch repair
RGI145_01005
03440 Homologous recombination
RGI145_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgi03032
]
RGI145_01005
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_01005
Enzymes [BR:
rgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGI145_01005
DNA replication proteins [BR:
rgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGI145_01005
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGI145_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
APT55904
UniProt:
A0A1L7AAS6
LinkDB
All DBs
Position
1:222994..223590
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AA seq
198 aa
AA seq
DB search
MMDLATKPAPAHPVLSLQSDVVVFDTETTGCTIGDRVVSLGAVRLDPALDVVATLHLVFA
PGRRCHPGAVRVHGLTDRFLARQPAFEAHAGEVSAFFEGAVACAHNLAFDRRMLGGEFDR
LGLTRPWQGEYCTLRAWRLYRPGQRAGLDAASAALGLARESDQHGALEDACLASQLLRAL
HGLPPGRMTLHDPTNLRD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatggacctcgccacgaaacccgccccggcgcaccccgtgctttccctgcagagtgat
gtggtcgtcttcgacaccgagaccaccggctgcaccatcggcgaccgggtcgtttccctt
ggcgcggtccggctcgatcccgccctggacgtggtggcgaccctgcatctcgtcttcgcg
ccgggccgccgctgccacccgggcgcggtgcgggtccatggcctgaccgaccgcttcctg
gcccgccagccggccttcgaggcccatgccggggaggtctcggccttcttcgagggggcc
gtggcctgcgcgcacaacctcgccttcgaccgccgcatgctgggcggggaattcgaccgg
ctgggcctcacccggccctggcagggggaatactgcaccttgcgcgcctggcgcctctac
cgccctggccagcgcgccgggctggatgccgcctcggctgccctgggcctcgcccgggaa
agcgaccagcacggcgcgctggaggatgcctgcctcgccagccagctcctccgcgccctg
cacggtctgccccccggtcgcatgaccctgcacgatccgacgaacctgcgggactga
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