Roseomonas gilardii: RGI145_01305
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Entry
RGI145_01305 CDS
T04615
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03030
DNA replication
rgi03410
Base excision repair
rgi03420
Nucleotide excision repair
rgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGI145_01305
03410 Base excision repair
RGI145_01305
03420 Nucleotide excision repair
RGI145_01305
03440 Homologous recombination
RGI145_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgi03032
]
RGI145_01305
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_01305
Enzymes [BR:
rgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGI145_01305
DNA replication proteins [BR:
rgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RGI145_01305
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RGI145_01305
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGI145_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
APT58992
UniProt:
A0A1L7AJR5
LinkDB
All DBs
Position
1:287540..290356
Genome browser
AA seq
938 aa
AA seq
DB search
MPGAVGDVPATPPGERHLILVDGSGYIFRAFHALPPMTNPEGVPVNAVFGFSGMLSNFLS
RHVGSHIAVVFDASRSTFRNEIYPDYKAHRPEPPPELVPQFKMIREATAAFGVACVEQQG
YEADDMIASYAVAFARDGGRVTIVSSDKDLMQLVEDRVELLDPIKQKPIRAAEVMEKFGV
PPEKVVEVQALAGDPTDNVPGVPGIGVKTAAQLIETYGDVETLLSRLSEIKQPKRRQTLE
ENAENARISRRLVELDRNAPLPHPVEEFATRPPEPARLSGFLERNGFRSLQHRLGLSQDG
LRDSGVRRPPAALEAPVTAEPLAVPAEAAPFGPYETIADLATLERWIARAREAGVVAVDT
ETDSLDALAANLVGICLAVAPGQAAYLPLRHASGDLLQPAPQQVPFDEAIALLRPLLAEP
GTLKVLHNAKYDTEVLARPENGGLAVDPVDDTMLLSYSLDAGRHGHGMDELSRRHLAHQP
ITYDEVTGTGRARKPFAQVPLEQAAAYAAEDADVTLRLWLALKPLLRERKALALYEQVER
RMIAVLRDMETAGIKVDGEELARIGEDFSQRMAALETEIHGLAGRAFNVGSPKQLGEILF
GEMGLPGGRKGKTGAYSTDVFVLEELAAQGHELPRKVLDWRQLSKLKSTYVEGLQAQIAA
DGRVHTDFSMAITSTGRLSSTEPNLQNIPIRTEEGAKIRRAFVAEPGHVLLAADYSQIEL
RLLAHMADVPTLREAFSKGEDIHTRTAREIFRLPDGAPVDRELRRRAKTVNFGIIYGISA
FGLGPRLGISPGEARGIIDAYFAQYPGIRDAMEAIKEEARIHGFVRTSFGRALWIPDITV
KQAQIRANAERQAINAPFQGGAAEIIKRAMVRMPLALREAGLSARMLLQVHDELLFEVPE
GEVEATAKLVREVMEGVATLHVPLSVEVGTGHSWAEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggccgtgggcgacgtgcccgctaccccgccgggcgagcggcacctgatcctg
gtggacgggtcgggctacatcttccgcgccttccacgccctgccgccgatgaccaatccg
gaaggcgtgccggtgaacgccgtcttcggcttctccggcatgctgtcgaatttcctgtcc
cggcatgtgggcagccacatcgctgtggtcttcgacgcctcccgcagcaccttccgcaac
gagatctaccccgactacaaggcgcaccggcccgagccgccgccggagctggtgccccag
ttcaagatgatccgcgaggccacggcggccttcggcgtcgcctgcgtggagcagcagggc
tacgaggcggacgacatgatcgcctcctatgccgtcgccttcgcgcgggatggcgggcgg
gtgacgatcgtctcctccgacaaggacctgatgcagctcgtggaggatcgggtcgagctg
ctggacccgatcaagcagaagccgatccgcgccgccgaggtgatggagaagttcggcgtg
ccgccggagaaggtggtcgaggtccaggccctggccggcgaccccaccgacaacgtgccg
ggcgtgccgggcatcggcgtgaagaccgccgcccagctcatcgagacctatggcgacgtg
gagacgctgctttcccgcctgtccgagatcaagcagcccaagcgccgccagacgctggag
gagaatgcggagaatgcccgcatcagccgccggctggtggagctggaccgcaacgccccc
ctgccgcatccggtggaggaattcgcgacccggccgcccgagccggcgcggctgagcggc
ttcctggagcgcaacggcttccgctcgctccagcaccggctggggctgagccaggacggc
ctgcgcgatagcggcgtccgccgcccgccggccgcgctggaggcccccgtgacggcggag
ccgctggcggtgccggccgaggccgcgcccttcggcccctacgagaccattgccgacctc
gccacgctggagcgctggatcgcgcgggcgcgtgaggccggggtggtggcggtggacacg
gagacggacagcctggacgcgctggcggccaacctcgtgggcatctgcctcgccgtggcg
cccggccaggcggcctatctgccgctgcgccatgcctcgggcgacctgttgcagccggcg
ccgcagcaggtgcccttcgacgaggcgatcgccctgctgcgcccgctgctggccgagcct
ggcacgctgaaggtgctgcacaacgcgaaatacgacaccgaggtgctggcgcggccggag
aatggcggcctcgccgtcgatccggtggacgacaccatgctgctctcctacagcctcgat
gccgggcggcacgggcatgggatggacgagctgtcgcgccgccacctcgcgcaccagccg
atcacctatgacgaggtgaccggcaccggccgggcgcgcaagcccttcgcccaggtgccg
ctggagcaggccgccgcctatgccgccgaggatgcggatgtcacgctgcgcctctggctg
gcgctgaagccgctgctgcgcgagcgcaaggccctggccctctatgagcaggtcgagcgc
cgcatgatcgccgtgctgcgcgacatggaaaccgccggcatcaaggtggatggcgaggag
ctggcgcggatcggcgaggatttctcccaacgcatggcggcgctggagacggagatccac
ggcctcgccggccgtgccttcaacgtcggttcccccaagcagctcggcgagatcctgttc
ggcgagatgggcctgccgggtggccgcaagggcaagaccggcgcctattccaccgatgtc
ttcgtgctggaggaattggcggcgcagggccacgagctgccgcgcaaggtgctggactgg
cggcagctctccaagctgaaatccacctatgtggaagggctgcaggcgcagatcgccgcc
gatggccgggtccatacggatttcagcatggccatcacctccaccggccggctgtcctcc
accgagcccaacctgcagaacattcccatccgcacggaagaaggcgcgaagatccgccgc
gccttcgtggcggagccggggcatgtgctgctggccgcggactattcgcagatcgagctg
cggctgctggcccatatggccgacgtgccgacgctgcgcgaggccttcagcaagggcgag
gacatccacacccgcacggcgcgggagatcttccgcctgccggacggggcgccggtggac
cgcgagctgcgccgccgcgccaagacggtgaatttcggcatcatctacggcatctcggcc
ttcggcctggggccacggctgggcatctccccgggcgaggcgcgcggcatcatcgacgcc
tatttcgcgcagtatccgggcatccgcgacgcgatggaggcgatcaaggaggaggcccgc
atccacggcttcgtccgtacctccttcggccgggcgctctggattcccgacatcaccgtc
aagcaggcgcagatccgcgccaatgccgagcggcaggcgatcaacgcccccttccaggga
ggtgctgcggagatcatcaagcgcgccatggtccgcatgccgctggcgctgcgcgaggcc
gggctttcggcgcggatgctgctgcaggtgcacgacgaactgctcttcgaggtgccggag
ggcgaggtcgaggcgacggcgaagctggtgcgggaggtgatggagggcgtggcgaccctg
catgtccccctctccgtggaggtcgggacaggccattcctgggccgaggcgcactga
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