Roseomonas gilardii: RGI145_01915
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Entry
RGI145_01915 CDS
T04615
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGI145_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_01915
Enzymes [BR:
rgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RGI145_01915
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RGI145_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
APT56056
UniProt:
A0A1L7AB95
LinkDB
All DBs
Position
1:complement(432735..433535)
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AA seq
266 aa
AA seq
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MRIVTWNINSVRLRAPLLSHLVDALEPDVLCLQETKSPDEHFPHEAVEALGFGHRLIRGM
KGYNGVAVLSRRPLRLREGEPNWCSRDDCRHLGVDVEAEGGAVELHNFYVPAGGDLPDRE
ANPKFAHKLDFIREITDWTAGRGAAKRAVLVGDLNIAPLEHDVWSHRQMLGVVSHTPVEV
EAMAGWQRAGEWHDALRHFVPPEEKLYTWWSYRARDWEAANRGRRLDHVWVSQDLAGKLR
SHTVLKPARSWAQCSDHVPVLVELDL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgaggatcgtcacctggaacatcaacagcgtgcgcctgcgggcgccgctgctgagtcac
ctcgtcgatgcgctggagccggacgtgctctgcctgcaggagacgaagtcgcccgacgag
catttcccgcatgaggcggtggaggcgctgggcttcggccaccggctgatccgcggcatg
aagggctacaacggcgtggcggtgctgtcgcgccgccccctgcggctgcgggagggcgag
ccgaactggtgctcgcgcgacgactgccggcatctcggcgtggatgtggaggccgagggc
ggcgcggtcgagctccacaatttctacgtgcccgccggcggcgacctgccggaccgggag
gccaacccgaaattcgcgcacaagctggatttcatccgggagatcaccgactggaccgcc
gggcgcggcgcggcgaagcgggcggtgctggtgggcgacctgaacatcgcgccgctggag
cacgatgtctggtcgcaccggcagatgctgggcgtcgtctcgcacacgccggtcgaggtc
gaggcgatggccggctggcagcgggcgggcgagtggcacgatgcgctgcggcatttcgtg
ccgccggaggagaagctctacacgtggtggtcctatcgcgcgcgcgactgggaggccgcg
aatcgcgggcggcggctggaccatgtctgggtcagccaggacctggcggggaagctgcgc
tcgcacaccgtgctgaagccggcgcggagctgggcgcagtgctcggaccatgtgccggtg
ctggtggagctggatctctga
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