Roseomonas gilardii: RGI145_02620
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Entry
RGI145_02620 CDS
T04615
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGI145_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgi03019
]
RGI145_02620
Messenger RNA biogenesis [BR:
rgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RGI145_02620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
APT56169
UniProt:
A0A1L7ABZ1
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All DBs
Position
1:complement(602892..603374)
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AA seq
160 aa
AA seq
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MSDLPYRPNVGAVLFNAQGRVLVARRADQPHGEAAAGAWQLPQGGLDEGEEPRQAVLREL
AEEIGTDKAEILAEHDEWLRYDLPEHLIGKIWGGRWRGQEQRWFALRFTGQDSDIRLDAD
AHQEFDAWRWARLEELPGLAVPFKRPIYEALTSAFARFAG
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctgccctaccgccccaatgtcggcgccgtgctcttcaatgcccaggggcgg
gtgctggtggcgcgccgggcggaccagccgcatggggaagcggcggccggcgcctggcag
ctcccccagggcgggctggacgagggcgaggagccgcgccaggccgtgctgcgcgaactg
gccgaggagatcggcaccgacaaggccgagatcctggccgagcatgatgagtggctgcgc
tacgatctgccggaacacctgatcggcaagatctggggcggccgctggcgcggacaggaa
cagcgctggttcgccctgcgcttcaccggccaggattccgacatccgcctggacgccgat
gcccatcaggagttcgacgcctggcgctgggccaggctggaggaactccccggtctcgcc
gtccccttcaagcgcccgatctacgaggccctgaccagcgccttcgcccgcttcgctggc
tga
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